HOMD ::Species:Haemophilus pittmaniae

Species: Haemophilus pittmaniae (HMT-0946) Primary Body Site: Oral

Full Lineage: Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus; Haemophilus pittmaniae

LINKS: Ecology Home | HMT-0946: [Body Sites Data] [Taxon Description] | Life Page: Haemophilus pittmaniae

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping ND:Erenv1v3 Eren V3-V5 ND:HMPv1v3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Species: Haemophilus pittmaniae

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.14	0.19	0.01	0.37	0.44	0.18	0.35	0.20	0.45	0.31	0.02	0.01	0	0.02	0	0.01	0	0.01
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0.02	0.01	0	0.05	0.09	0.18	0.14	0.01	0.03	0.03	0	0	0	0.02	0	0	0	0
90^thp	0.20	0.42	0.01	0.77	1.02	0.18	0.65	0.46	1.06	0.68	0.03	0.03	0	0.02	0	0.04	0.01	0.01
Stdev	0.25	0.22	0.02	0.32	0.43	0	0.29	0.22	0.86	0.28	0.04	0.01	0	0	0	0.02	0.02	0.03
Prev(%)	0	0.51	0	0	4.02	100.00	0	42.86	18.18	16.08	0	0	0	0	0	0	0	0.80

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0	0	0.04	0.01	0.03	0.09	0.03	0.05	0.02	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0	0.04	0.11	0.04	0.04	0.03	0
Stdev	0.02	0	0.36	0.06	0.17	0.57	0.11	0.20	0.17	0
Prev(%)	2.70	1.35	6.08	9.46	13.51	22.30	14.19	15.54	12.16	0.70

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.03	0.07	0.52	0.27	0.06	0.10	0	0.11	0	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.09	0.19	1.33	0.75	0.13	0.19	0	0.21	0	0	0	0	0	0	0	0	0	0
Stdev	0.07	0.14	1.07	0.50	0.28	0.39	0	0.41	0	0	0	0	0	0	0	0	0	0
Prev(%)	40.74	52.68	74.57	66.25	31.20	44.94	0	40.15	0	0	0	0	0	0	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.01	0.02	0.08	0.13	0.04	0.04	0.03	0.07	0.02	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.03	0.06	0.21	0.23	0.09	0.12	0.07	0.12	0.05	0
Stdev	0.02	0.04	0.14	0.30	0.05	0.07	0.07	0.28	0.05	0
Prev(%)	51.35	52.94	81.39	91.43	85.71	76.00	51.52	58.06	55.00	0

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0	0	0	0.01	0.02	0.01	0.04	0.27	0.02	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0.02	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0	0	0.02	0.05	0.05	0.16	0.02	0	0	0	0	0	0	0	0
Stdev	0	0	0	0	0.08	0	0.03	0.12	1.00	0.12	0	0	0	0	0	0	0	0.01
Prev(%)	0	0.25	0	0	7.18	100.00	25.00	18.75	20.00	15.26	0.45	0	0	0	0	0	0	0.73

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