Species: Haemophilus sp. HMT-036 (HMT-0036) Primary Body Site: Oral
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| HMT-0036: [Body Sites Data]
[Taxon Description]
| Life Page: Haemophilus sp. HMT-036
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Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Body Site Legend:
| SUBP-- Subgingival Plaque |
| SUPP -- Supragingival Plaque |
| PERIO -- Periodontal |
| AKE -- Attached Keratinized Gingiva |
| BMU -- Buccal Mucosa |
| HPA -- Hard Palate |
| SAL -- Saliva |
| THR -- Throat |
| PTO -- Palatine Tonsils |
| TDO -- Tongue Dorsum |
| ANA -- Anterior Nares |
| LRC -- L_Retroauricular Crease |
| RRC -- R_Retroauricular Crease |
| LAF -- L_Antecubital Fossa |
| RAF -- R_Antecubital Fossa |
| VIN -- Vaginal Introitus |
| MVA -- Mid Vagina |
| PFO -- Posterior Fornix |
| STO -- Stool |
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Human Microbiome Project Mapping (Data from healthy subjects. - not published)
No Notes
| SUBP | SUPP | PERIO | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | RAF | VIN | MVA | PFO | STO | |
| Avg (%) | 0.13 | 0.20 | 0.01 | 4.01 | 3.29 | 3.48 | 0.66 | 0.09 | 0.41 | 0.14 | 0.03 | 0.01 | 0.09 | 0.02 | 0 | 0.06 | 0 | 0 |
| n | 24 | 395 | 24 | 15 | 323 | 1 | 8 | 7 | 22 | 423 | 65 | 23 | 30 | 1 | 4 | 8 | 94 | 375 |
| 10thp | 0.03 | 0.02 | 0 | 0.45 | 0.28 | 3.48 | 0.19 | 0.02 | 0.04 | 0.02 | 0 | 0 | 0 | 0.02 | 0 | 0 | 0 | 0 |
| 90thp | 0.28 | 0.47 | 0.02 | 11.52 | 7.93 | 3.48 | 1.26 | 0.15 | 0.77 | 0.30 | 0.09 | 0.03 | 0.01 | 0.02 | 0 | 0.19 | 0.01 | 0.01 |
| Stdev | 0.14 | 0.27 | 0.01 | 4.60 | 3.92 | 0 | 0.44 | 0.06 | 0.58 | 0.13 | 0.04 | 0.02 | 0.45 | 0 | 0 | 0.12 | 0.01 | 0.01 |
| Prev(%) | 41.67 | 55.44 | 0 | 93.33 | 84.52 | 100.00 | 50.00 | 42.86 | 59.09 | 39.48 | 0 | 0 | 3.33 | 0 | 0 | 12.50 | 0 | 0.27 |
Eren V1-V3 www.pnas.org
(Data from healthy subjects.)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | STO | |
| Avg (%) | 0.02 | 0.01 | 1.31 | 0.33 | 0.08 | 0.09 | 0.03 | 0.02 | 0 | 0 |
| n | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| 10thp | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 90thp | 0.05 | 0.02 | 4.19 | 0.81 | 0.25 | 0.22 | 0.09 | 0.06 | 0 | 0 |
| Stdev | 0.05 | 0.04 | 2.41 | 0.71 | 0.18 | 0.22 | 0.06 | 0.05 | 0.02 | 0 |
| Prev(%) | 20.78 | 19.48 | 80.52 | 76.62 | 55.84 | 48.05 | 29.87 | 35.06 | 7.79 | 0 |
Eren V3-V5 www.pnas.org
(Data from healthy subjects.)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | STO | |
| Avg (%) | 0.03 | 0.03 | 1.47 | 0.60 | 0.14 | 0.19 | 0.12 | 0.18 | 0.01 | 0 |
| n | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| 10thp | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 90thp | 0.07 | 0.04 | 3.67 | 1.62 | 0.33 | 0.42 | 0.16 | 0.58 | 0.04 | 0 |
| Stdev | 0.13 | 0.14 | 4.59 | 1.51 | 0.47 | 0.54 | 0.61 | 0.52 | 0.03 | 0 |
| Prev(%) | 19.59 | 16.89 | 50.68 | 50.00 | 31.08 | 48.65 | 38.51 | 33.11 | 19.59 | 0 |
Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)
Notes:
Reads equidistant to HMT-036 and HMT-851 were assigned to each taxon in proportion to the abundance of HMT-036 and HMT-851 individually at these body sites (AKE, BMU).
Reads equidistant to HMT-036 and HMT-851 were assigned to each taxon in proportion to the abundance of HMT-036 and HMT-851 individually at these body sites (AKE, BMU).
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | LAF | RAF | VIN | MVA | PFO | STO | |
| Avg (%) | 0 | 0 | 0.13 | 0.06 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| n | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| 10thp | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 90thp | 0 | 0 | 0.29 | 0.10 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| Stdev | 0 | 0 | 0.41 | 0.30 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| Prev(%) | 0 | 0 | 44.06 | 25.34 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)
Notes:
No data – the v3v5 region of the 16S rRNA gene does not distinguish this species from its close relatives.
No data – the v3v5 region of the 16S rRNA gene does not distinguish this species from its close relatives.
Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)
Notes:
Reads equally close to HMT 036 and 851 were assigned half to each taxon.
Reads equally close to HMT 036, 851, and 908 were assigned one-third to each taxon.
Reads equally close to HMT 036 and 851 were assigned half to each taxon.
Reads equally close to HMT 036, 851, and 908 were assigned one-third to each taxon.
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | |
| Avg (%) | 0.05 | 0.03 | 2.42 | 0.57 | 0.26 | 0.01 | 0.06 | 0.05 | 0.08 | 0.01 |
| n | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| 10thp | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 90thp | 0.03 | 0.08 | 6.42 | 0.84 | 0.54 | 0.05 | 0.13 | 0.20 | 0.16 | 0 |
| Stdev | 0.23 | 0.08 | 5.66 | 1.97 | 0.71 | 0.02 | 0.19 | 0.10 | 0.25 | 0.02 |
| Prev(%) | 55.41 | 41.18 | 76.74 | 85.71 | 75.00 | 52.00 | 78.79 | 51.61 | 50.00 | 5.00 |
Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)
No Notes
