HOMD ::Species:Haemophilus sputorum

Species: Haemophilus sputorum (HMT-0944) Primary Body Site: Oral

Full Lineage: Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus; Haemophilus sputorum

LINKS: Ecology Home | HMT-0944: [Body Sites Data] [Taxon Description] | Life Page: Haemophilus sputorum

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping Eren V1-V3 Eren V3-V5 HMP V1-V3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Species: Haemophilus sputorum

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.08	0.11	0.01	0.25	0.43	0.16	0.73	0.21	0.33	0.22	0.02	0.01	0	0.09	0	0.01	0	0
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0.01	0.01	0	0.07	0.10	0.16	0.12	0.01	0.03	0.02	0	0	0	0.09	0	0	0	0
90^thp	0.21	0.25	0.01	0.47	0.87	0.16	1.47	0.50	0.67	0.51	0.03	0.02	0.01	0.09	0	0.03	0	0.01
Stdev	0.13	0.12	0.01	0.18	0.35	0	0.62	0.30	0.46	0.21	0.04	0.02	0.01	0	0	0.01	0.01	0.01
Prev(%)	4.17	8.86	0	13.33	38.39	100.00	62.50	42.86	36.36	44.68	1.54	0	0	0	0	0	0	0

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0	0	0.02	0.05	0.02	0.04	0.02	0.02	0.01	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0.02	0.06	0.03	0.06	0.05	0.05	0.03	0
Stdev	0.01	0.01	0.11	0.27	0.06	0.17	0.06	0.07	0.03	0
Prev(%)	2.60	6.49	12.99	29.87	19.48	16.88	20.78	24.68	15.58	0

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.01	0.01	0.04	0.17	0.07	0.14	0.10	0.17	0.02	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.02	0.03	0.09	0.53	0.20	0.38	0.22	0.37	0.07	0
Stdev	0.02	0.01	0.10	0.28	0.13	0.25	0.22	0.51	0.07	0
Prev(%)	14.19	12.16	35.13	68.24	55.41	66.89	49.32	62.16	33.11	1.40

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0	0.03	0.07	0.03	0	0.05	0	0	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0.03	0.07	0.04	0	0.08	0	0	0	0	0	0	0	0	0	0	0
Stdev	0	0	0.16	0.38	0.08	0	0.17	0	0	0	0	0	0	0	0	0	0	0
Prev(%)	0	0	23.08	35.62	26.17	0	34.82	0	0	0	0	0	0	0	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0	0.18	0.64	0.28	0.34	0.29	0.31	0.06	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0.38	1.75	0.85	0.99	0.57	0.85	0.16	0	0	0	0	0	0	0	0	0
Stdev	0	0	0.64	1.16	0.48	0.58	0.95	0.73	0.14	0	0	0	0	0	0	0	0	0
Prev(%)	0	0	44.69	73.20	62.66	71.13	56.08	69.10	48.42	0	0	0	0	0	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.01	0.01	0.17	0.29	0.06	0.12	0.05	0.15	0.06	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.01	0.01	0.64	0.86	0.15	0.14	0.20	0.65	0.12	0
Stdev	0.04	0.05	0.31	0.65	0.09	0.32	0.07	0.31	0.19	0
Prev(%)	41.89	50.00	93.02	91.43	78.57	72.00	72.73	74.19	57.50	0

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.01	0.01	0	0.02	0.23	0.05	0.53	0.05	0.13	0.03	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0.05	0.02	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0.01	0	0.07	0.71	0.05	1.11	0.07	0.35	0.09	0	0	0	0	0	0	0	0
Stdev	0.03	0.07	0	0.05	0.49	0	0.51	0.15	0.33	0.09	0.01	0.01	0	0	0	0	0	0
Prev(%)	4.17	10.35	0	23.53	58.24	100.00	87.50	25.00	44.00	44.13	1.35	4.17	0	0	0	0	0	0.91

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