HOMD ::Family:Lactobacillaceae

Family: Lactobacillaceae

Full Lineage: Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae
Lower rank member(s): show[+]

[Genus:Lacticaseibacillus] [Genus:Lactiplantibacillus] [Genus:Lactobacillus] [Genus:Lentilactobacillus] [Genus:Levilactobacillus]
[Genus:Ligilactobacillus] [Genus:Limosilactobacillus]

LINKS: Ecology Home | Life Page: Lactobacillaceae

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

Show Legend

Available Datasets:
HMP Mapping ND:Erenv1v3 ND:Erenv3v5 HMP V1-V3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Family: Lactobacillaceae

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.01	0.26	0.42	0.02	0.02	0.02	0.04	0.01	0.01	0.01	1.38	0.09	0.09	2.82	74.97	72.35	72.06	0.02
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0	0	0	0	0.01	0.02	0.01	0	0	0	0	0	0	2.82	31.72	4.05	1.84	0
90^thp	0.01	0.01	0.01	0.04	0.04	0.02	0.09	0.02	0.02	0.01	0.21	0.13	0.07	2.82	99.31	99.29	99.58	0.03
Stdev	0.01	4.98	2.00	0.03	0.02	0	0.04	0.01	0.01	0.03	8.86	0.29	0.35	0	47.85	43.40	37.29	0.10
Prev(%)	0	0.76	8.33	0	0	0	0	0	0	0.95	4.62	8.70	6.67	100.00	100.00	87.50	98.94	1.07

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.11	0.01	0	0.09	0.01	0.04	0.01	0	0.07	0.53	0.11	0.19	1.62	1.17	82.18	87.86	91.07	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	45.05	72.14	77.21	0
90^thp	0.01	0.04	0	0.07	0	0.11	0	0	0.03	0.27	0.23	0.22	3.61	3.17	98.92	99.28	99.87	0
Stdev	1.34	0.03	0	0.54	0.07	0.13	0.04	0	0.69	4.83	0.43	1.54	7.68	2.91	24.23	20.50	21.22	0
Prev(%)	13.24	21.85	0	39.04	6.04	27.69	6.55	0	29.03	44.67	41.67	35.69	55.75	54.38	100.00	100.00	100.00	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.06	0.02	0.03	0.05	0.15	0	0.04	0.02	0.02	0.64	0.92	0.96	1.58	2.10	80.79	86.88	87.59	0.01
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	18.88	45.19	35.28	0
90^thp	0.05	0.02	0	0	0.06	0	0	0.01	0	0.40	0.35	0.56	3.48	4.85	99.49	99.90	99.98	0
Stdev	0.52	0.22	0.32	0.79	1.92	0	0.46	0.31	0.25	6.01	7.65	7.87	6.42	9.13	29.79	26.36	28.81	0.06
Prev(%)	23.46	14.39	8.89	8.69	18.41	0	10.28	11.19	8.03	48.28	36.94	39.20	57.24	62.67	99.42	99.45	98.43	5.60

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.01	0	0	0	0.01	0.01	0.01	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.01	0	0	0.01	0.03	0	0	0	0	0
Stdev	0.08	0.01	0	0.01	0.03	0.03	0.08	0	0	0
Prev(%)	16.22	14.71	6.98	22.86	17.86	10.00	15.15	16.13	5.00	10.00

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0.25	0.37	0.10	0.01	0	0.03	0	0.58	0	0.92	0.06	0.09	3.72	85.42	82.69	82.61	0.01
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	3.72	76.05	25.96	11.24	0
90^thp	0	0	0	0.02	0	0	0.07	0	0	0	0	0.02	0.07	3.72	99.49	99.28	100.00	0
Stdev	0	5.01	1.76	0.39	0.19	0	0.04	0	2.91	0.03	8.62	0.26	0.32	0	28.70	34.62	32.39	0.07
Prev(%)	0	1.77	8.33	11.77	2.66	0	37.50	0	8.00	1.88	7.66	20.83	28.13	100.00	100.00	92.86	100.00	5.46

[Genus:Lacticaseibacillus]	[Genus:Lactiplantibacillus]	[Genus:Lactobacillus]	[Genus:Lentilactobacillus]	[Genus:Levilactobacillus]
[Genus:Ligilactobacillus]	[Genus:Limosilactobacillus]

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