HOMD ::Species:Lactobacillus jensenii

Species: Lactobacillus jensenii (HMT-0839) Primary Body Site: Vaginal

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Full Lineage: Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus jensenii

LINKS: Ecology Home | HMT-0839: [Body Sites Data] [Taxon Description] | Life Page: Lactobacillus jensenii

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping ND:Erenv1v3 ND:Erenv3v5 HMP V1-V3 HMP V3-V5 HMP Metaphlan ND:Dewhirst35x9

No Available Datasets for Species: Lactobacillus jensenii

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0	0	0	0	0	0	0	0	0	0.07	0.01	0.04	0.14	3.99	4.27	3.48	0
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0.14	0.01	0.02	0	0
90^thp	0	0	0	0	0	0	0	0	0	0	0.01	0.01	0.01	0.14	11.13	13.51	5.57	0
Stdev	0	0.03	0	0	0	0	0	0	0	0	0.35	0.03	0.20	0	7.93	9.04	11.14	0.01
Prev(%)	0	0.25	0	0	0	0	0	0	0	0	3.08	0	3.33	0	25.00	25.00	46.81	0.27

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.01	0	0	0	0	0	0	0	0	0.08	0.01	0.01	0.07	0.06	8.77	10.58	10.85	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0	0	0	0	0	0	0.01	0	0	0.10	0.04	20.56	34.28	32.09	0
Stdev	0.15	0	0	0	0	0	0	0	0	0.81	0.04	0.13	0.27	0.29	20.52	22.21	24.57	0
Prev(%)	6.62	0	0	0	0	0	0	0	0	10.33	7.47	7.65	12.64	11.06	67.61	66.22	65.79	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0	0	0	0.02	0	0	0	0	0.10	0.13	0.18	0.07	0.27	8.45	9.43	9.34	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0	0.02	0	0	0	0	0.01	0	0.02	0.03	0.04	22.44	28.17	20.83	0
Stdev	0	0	0	0	0.20	0	0	0	0	1.10	2.10	2.48	0.37	2.74	20.91	22.48	23.60	0
Prev(%)	0	0	0	0	11.77	0	0	0	0	11.11	5.41	10.49	11.72	14.00	67.24	75.41	66.49	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0	0	0	0	0	0	0	0.10	0	0.02	0.01	0.03	0	5.80	3.68	9.36	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	13.15	8.01	36.34	0
Stdev	0	0.02	0	0	0	0	0	0	0.48	0	0.17	0.02	0.15	0	10.81	7.21	22.82	0
Prev(%)	0	0.25	0	0	0	0	0	0	4.00	0	0.90	8.33	3.13	0	54.55	57.14	54.04	0.18

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