HOMD ::Class:Mollicutes

Class: Mollicutes

Full Lineage: Bacteria; Mycoplasmatota; Mollicutes
Lower rank member(s): [Order:Mollicutes [O1]] [Order:Mollicutes [O2]] [Order:Mycoplasmoidales]
Genera:

LINKS: Ecology Home | Life Page: Mollicutes

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping ND:Erenv1v3 ND:Erenv3v5 HMP V1-V3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Class: Mollicutes

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.15	0.01	0.13	0	0.01	0	0.06	0.01	0.09	0.02	0	0	0	0.01	0.07	0.01	0.22	0
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0	0	0	0	0	0	0.01	0	0	0	0	0	0	0.01	0	0	0	0
90^thp	0.45	0.02	0.40	0.02	0.01	0	0.12	0.02	0.17	0.04	0.01	0	0	0.01	0.20	0.02	0.80	0
Stdev	0.22	0.06	0.25	0.01	0.01	0	0.06	0.01	0.25	0.05	0.02	0	0	0	0.14	0.03	0.57	0
Prev(%)	33.33	9.37	16.67	0	0.31	0	0	14.29	22.73	18.68	1.54	0	0	0	25.00	0	18.09	0

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.04	0.04	0	0	0	0.10	0.03	0.15	0.01	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.12	0.01	0	0	0	0.22	0.06	0.28	0.01	0	0	0	0	0	0	0	0	0
Stdev	0.14	0.41	0.01	0	0	0.31	0.12	0.48	0.02	0	0	0	0	0	0	0	0	0
Prev(%)	28.48	11.26	3.50	0	0	35.38	23.51	49.33	15.48	0	0	0	0	0	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.02	0	0	0	0	0.04	0	0.09	0	0	0	0	0	0	0	0.01	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.06	0	0	0	0	0.05	0	0.23	0	0	0	0	0	0	0	0	0	0
Stdev	0.07	0	0	0	0	0.23	0	0.32	0	0	0	0	0	0	0	0.14	0	0
Prev(%)	22.72	0	0	0	0	20.83	0	35.77	0	0	0	0	0	0	0	3.83	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.02	0.01	0	0.01	0.01	0.01	0.01	0.13	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.03	0.03	0.01	0.06	0.02	0.01	0.04	0.22	0	0
Stdev	0.05	0.01	0.01	0.04	0.02	0.02	0.03	0.41	0.01	0
Prev(%)	31.08	41.18	32.56	40.00	35.71	54.00	39.39	58.06	15.00	0

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.86	0.07	0.17	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3.53	0.04	0.52	0
Stdev	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1.61	0.26	0.57	0
Prev(%)	0	0	0	0	0	0	0	0	0	0	0	0	0	0	45.45	14.29	22.22	0

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