HOMD ::Species:Moraxella catarrhalis

Species: Moraxella catarrhalis (HMT-0833) Primary Body Site: Nasal

Full Lineage: Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Moraxella; Moraxella catarrhalis

LINKS: Ecology Home | HMT-0833: [Body Sites Data] [Taxon Description] | Life Page: Moraxella catarrhalis

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping Eren V1-V3 Eren V3-V5 HMP V1-V3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Species: Moraxella catarrhalis

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0	0	0	0	0	0	0	0	0	0.69	0	0	0.02	0	0	0	0
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0.02	0	0	0	0
90^thp	0	0	0	0	0	0	0	0	0	0	0.44	0	0	0.02	0	0	0	0
Stdev	0	0	0	0	0	0	0	0	0	0.01	3.91	0	0	0	0	0	0	0
Prev(%)	0	0	0	0	0	0	0	0	0	0	6.15	0	0	0	0	0	0	0

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

Notes:
reads equally close to M. catarrhalis and M. nonliquefaciens were assigned half to each taxon

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0	0	0	0	0	0.01	0.10	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0	0	0	0	0	0	0
Stdev	0	0	0	0	0	0.11	0.78	0	0	0
Prev(%)	0	0	0	0	0	1.30	6.49	1.30	0	0

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

Notes:
Reads equally close to M. catarrhalis and M. nonliquefaciens were assigned half to each taxon.

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0	0	0	0	0	0	0.38	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0	0	0	0	0	0	0
Stdev	0.01	0	0	0	0	0	3.12	0	0	0
Prev(%)	0.68	0	0	0	0	0.68	4.73	1.35	0	0

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0	0	0	0	0	0.27	0	0	0.26	0	0	0	0.01	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Stdev	0	0	0	0	0	0	2.73	0	0	2.39	0	0	0	0.08	0	0	0	0
Prev(%)	0	0	0	0	0	0	3.57	0	0	5.33	0	0	0	2.77	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

Notes:
Reads equidistant to HMT-098 and HMT-833 were assigned to each taxon in proportion to the abundance of HMT-098 and HMT-833 individually at this body site (ANA).

Neither HMT-098 nor HMT-833 were present singularly so these reads were split evenly at this site (RAF).

Because HMT-098 is not present individually, all equidistant reads were assigned to HMT-833 at this body site (THR).

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0	0	0	0	0	1.04	0	0	1.88	0	0	0	0.05	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0	0	0	0.02	0	0	0.91	0	0	0	0.07	0	0	0	0
Stdev	0	0	0	0	0	0	7.64	0	0	7.88	0	0	0	0.29	0	0	0	0
Prev(%)	0	0	0	0	0	0	10.28	0	0	17.24	0	0	0	17.33	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0	0	0	0	0	0	0	0	0	0.11
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0	0	0	0	0	0	0
Stdev	0	0	0	0	0	0	0	0	0	0.51
Prev(%)	0	0	0	0	0	0	0	0	0	5.00

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0	0	0	0	0	0	0	0	0	1.78	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Stdev	0	0	0	0	0	0	0	0	0	0	10.29	0	0	0	0	0	0	0
Prev(%)	0	0	0	0	0	0	0	0	0	0	6.76	0	0	0	0	0	0	0

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