HOMD ::Genus:Nanosyncoccus

Genus: Nanosyncoccus

Full Lineage: Bacteria; Patescibacteria; Saccharimonadia; Saccharimonadales; Nanosyncoccaceae; Nanosyncoccus
Lower rank member(s): [Species:Nanosyncoccus alces] [Species:Nanosyncoccus nanoralicus] [Species:Nanosyncoccus sp. HMT-351] [Species:Nanosyncoccus sp. HMT-364]

LINKS: Ecology Home | Life Page: Nanosyncoccus

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping Eren V1-V3 ND:Erenv3v5 HMP V1-V3 HMP V3-V5 ND:Metaphlan Dewhirst 35x9

No Available Datasets for Genus: Nanosyncoccus

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.11	0.04	0.04	0.04	0.07	0.18	3.24	1.23	0.52	0.45	0.02	0	0	0.07	0	0	0.01	0
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0	0	0	0.01	0.01	0.18	0.57	0.46	0.07	0.04	0	0	0	0.07	0	0	0	0
90^thp	0.11	0.09	0.07	0.12	0.16	0.18	6.02	2.44	1.43	1.02	0.02	0	0	0.07	0	0.01	0	0.01
Stdev	0.38	0.12	0.09	0.05	0.11	0	2.66	1.10	0.57	0.53	0.09	0	0	0	0	0	0.09	0.02
Prev(%)	16.67	15.70	8.33	6.67	5.57	100.00	75.00	100.00	54.55	88.89	1.54	0	0	0	0	0	0	0.53

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.04	0.02	0.01	0.03	0.11	4.25	0.31	0.23	0.20	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0.17	0	0	0	0
90^thp	0.11	0.05	0	0.08	0.26	11.90	0.63	0.52	0.45	0
Stdev	0.15	0.09	0.02	0.04	0.17	5.73	0.35	0.38	0.37	0
Prev(%)	24.68	20.78	7.79	40.26	70.13	96.10	81.82	77.92	74.03	0

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.09	0.03	0	0.03	0.09	3.29	0.20	0.22	0.17	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0.09	0	0.01	0	0	0	0	0	0	0	0	0	0
90^thp	0.13	0.06	0	0.07	0.20	8.41	0.48	0.61	0.37	0	0	0	0	0	0	0	0	0
Stdev	0.30	0.09	0	0.06	0.13	4.54	0.24	0.29	0.34	0	0	0	0	0	0	0	0	0
Prev(%)	41.72	28.48	0	45.20	65.10	93.85	78.57	90.00	81.29	0	0	0	0	0	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0	0	0	0	0.12	0	0	0	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0	0	0.31	0	0	0	0	0	0	0	0	0	0	0	0
Stdev	0	0	0	0	0	0.28	0	0	0	0	0	0	0	0	0	0	0	0
Prev(%)	0	0	0	0	0	57.44	0	0	0	0	0	0	0	0	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.03	0.04	0.03	0.02	0.01	0.06	0.06	0.04	0.03	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.07	0.14	0.13	0.08	0.03	0.16	0.13	0.10	0.07	0
Stdev	0.08	0.09	0.08	0.04	0.02	0.08	0.07	0.05	0.04	0
Prev(%)	47.30	58.82	39.53	74.29	75.00	92.00	90.91	93.55	72.50	0

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

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