HOMD ::Genus:Olsenella

Genus: Olsenella

Full Lineage: Bacteria; Actinomycetota; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella
Lower rank member(s): [Species:Olsenella phocaeensis] [Species:Olsenella profusa] [Species:Olsenella sp. HMT-807] [Species:Olsenella sp. HMT-939] [Species:Olsenella uli]

LINKS: Ecology Home | Life Page: Olsenella

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping ND:Erenv1v3 ND:Erenv3v5 HMP V1-V3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Genus: Olsenella

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.15	0.05	0.55	0	0.01	0	0.02	0	0.01	0.01	0	0	0	0.01	0	0	0	0.01
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0	0	0.02	0	0	0	0	0	0	0	0	0	0	0.01	0	0	0	0
90^thp	0.40	0.14	1.62	0	0.02	0	0.05	0	0.02	0.01	0	0	0	0.01	0	0	0	0.03
Stdev	0.21	0.13	0.71	0	0.08	0	0.02	0	0.04	0.01	0	0	0	0	0	0	0	0.01
Prev(%)	50.00	26.08	58.33	0	1.24	0	0	0	0	0.24	0	0	0	0	0	0	0	0

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.02	0.01	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.07	0.02	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Stdev	0.06	0.02	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Prev(%)	35.76	18.54	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.04	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Stdev	0.13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Prev(%)	36.30	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.12	0.07	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.16	0.09	0	0.01	0	0.01	0	0.01	0	0
Stdev	0.48	0.30	0.01	0.01	0.01	0.01	0	0	0	0
Prev(%)	55.41	58.82	18.61	25.71	7.14	30.00	18.18	22.58	2.50	0

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.16	0.06	0.55	0	0.01	0	0	0	0.01	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.41	0.17	1.68	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Stdev	0.24	0.15	0.73	0	0.11	0	0	0	0.03	0.01	0	0	0	0	0	0	0	0.01
Prev(%)	62.50	33.59	75.00	0	6.65	0	0	0	8.00	2.35	0	0	0	0	0	0	0	0.36

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