HOMD ::Family:Oscillospiraceae

Family: Oscillospiraceae

Full Lineage: Bacteria; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae
Lower rank member(s): [Genus:Faecalibacterium] [Genus:Fastidiosipila] [Genus:Hominimerdicola]

LINKS: Ecology Home | Life Page: Oscillospiraceae

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping ND:Erenv1v3 ND:Erenv3v5 ND:HMPv1v3 HMP V3-V5 HMP Metaphlan ND:Dewhirst35x9

No Available Datasets for Family: Oscillospiraceae

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0	0	0.02	0.02	0	0.01	0	0.01	0.03	0.41	0.01	0.01	0.15	0.02	0.16	0.09	6.00
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0.15	0.01	0	0	0.28
90^thp	0	0	0.01	0.01	0.02	0	0.01	0.01	0.02	0.01	0.95	0.03	0.04	0.15	0.04	0.43	0.12	13.89
Stdev	0	0.01	0	0.07	0.11	0	0.01	0	0.04	0.59	1.14	0.03	0.03	0	0.02	0.41	0.36	9.33
Prev(%)	0	0.51	0	0	1.55	0	0	0	4.55	0.95	9.23	4.35	6.67	0	0	12.50	4.26	92.00

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.03	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Stdev	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.25	0	0	0
Prev(%)	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6.32	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0	0	0.19	0.01	0	0	0	0.23	0.02	0.12	0	0	0	0	0.06	0.03	2.79
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.16
90^thp	0	0	0	0.11	0	0	0	0	0.01	0	0	0	0	0	0	0	0	6.57
Stdev	0	0.01	0	0.70	0.11	0	0	0	1.13	0.45	0.84	0.02	0.02	0	0	0.24	0.21	3.23
Prev(%)	0	1.26	0	11.77	2.93	0	0	0	12.00	1.17	4.05	4.17	6.25	0	0	7.14	3.54	96.55

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