HOMD ::Order:Pasteurellales

Order: Pasteurellales

Full Lineage: Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales
Lower rank member(s): [Family:Pasteurellaceae]
Genera:

LINKS: Ecology Home | Life Page: Pasteurellales

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping Eren V1-V3 Eren V3-V5 HMP V1-V3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Order: Pasteurellales

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	5.42	7.32	0.79	18.00	18.62	10.04	12.15	4.10	8.56	9.17	0.57	0.23	0.22	1.09	0.01	0.61	0.12	0.14
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	1.14	1.03	0	5.60	4.78	10.04	4.62	0.42	1.37	0.95	0.06	0.01	0.01	1.09	0	0	0	0
90^thp	8.83	14.97	2.13	34.12	35.92	10.04	22.83	8.47	16.40	20.65	1.12	0.82	0.20	1.09	0.03	2.34	0.14	0.30
Stdev	7.48	7.08	1.65	11.20	12.47	0	9.78	3.54	7.47	8.09	1.25	0.41	0.73	0	0.01	1.12	0.58	0.53
Prev(%)	100.00	98.99	37.50	100.00	99.38	100.00	100.00	100.00	100.00	99.53	9.23	17.39	20.00	0	0	25.00	6.38	24.00

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	1.12	2.16	6.44	3.40	2.13	2.76	2.64	1.93	2.61	0.01
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0.01	0.91	0.36	0.25	0.16	0.03	0.05	0.02	0
90^thp	2.74	3.99	16.64	8.13	4.63	8.65	4.92	4.14	7.75	0.05
Stdev	2.19	5.76	6.54	4.44	3.07	4.04	9.30	3.14	4.56	0.03
Prev(%)	81.82	89.61	100.00	97.40	100.00	96.10	94.81	94.81	93.51	18.18

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	5.07	7.29	22.23	13.28	8.97	10.90	6.01	8.72	9.59	0.06
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.49	1.20	7.89	4.16	2.54	4.08	0.84	1.06	1.33	0
90^thp	11.75	16.77	38.43	24.71	16.03	19.89	12.95	17.55	20.77	0.15
Stdev	5.38	6.65	11.52	8.87	5.91	6.76	5.31	7.27	7.28	0.20
Prev(%)	99.32	100.00	100.00	100.00	100.00	100.00	100.00	100.00	100.00	30.77

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	1.00	1.56	6.69	3.83	1.92	2.45	1.68	1.57	1.85	0.10	0.05	0.05	0.14	0.33	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.02	0.02	0.22	0.18	0.12	0.03	0.07	0.03	0.03	0	0	0	0	0	0	0	0	0
90^thp	2.29	3.32	16.80	9.19	4.77	6.45	3.67	3.88	5.16	0.13	0.10	0.09	0.37	0.41	0	0	0	0
Stdev	1.87	4.02	7.12	4.64	2.30	4.28	4.88	2.52	3.55	0.68	0.15	0.20	0.35	1.70	0	0	0	0
Prev(%)	93.38	96.03	99.30	97.94	97.99	92.31	97.32	95.33	96.13	46.67	37.07	37.68	54.60	56.68	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	7.26	11.27	30.95	28.73	18.13	14.36	10.07	11.81	13.91	0.62	1.52	1.77	2.52	3.08	0	0	0	0.10
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.80	1.39	3.28	8.48	5.63	4.05	0.91	1.47	1.28	0	0	0	0	0	0	0	0	0
90^thp	16.97	26.16	67.73	55.41	32.97	26.63	22.68	24.26	30.14	1.59	1.51	0.93	3.90	6.31	0	0	0	0.20
Stdev	7.26	10.55	24.57	18.24	11.66	9.69	10.40	10.77	11.70	1.39	5.91	7.71	8.36	8.67	0	0	0	0.32
Prev(%)	99.75	99.76	100.00	99.75	100.00	99.70	99.69	100.00	100.00	74.71	61.78	55.56	80.69	77.33	0	0	0	45.01

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	2.58	3.18	13.88	10.08	6.72	4.76	3.73	3.58	5.79	0.01
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.03	0.05	0.97	1.68	1.59	0.21	0.20	0.18	0.25	0
90^thp	6.54	9.32	35.94	24.72	13.49	10.76	10.32	9.60	15.85	0.04
Stdev	4.28	4.55	14.87	9.79	5.19	4.42	5.22	4.41	7.08	0.04
Prev(%)	98.65	100.00	100.00	100.00	100.00	98.00	100.00	100.00	100.00	20.00

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	3.95	5.48	0.60	18.52	20.82	11.61	9.04	4.69	5.34	5.33	0.24	0.07	0.17	0	0.03	0.30	0.09	0.04
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.72	0.75	0	4.55	4.14	11.61	3.73	0.17	0.80	0.56	0	0	0	0	0	0	0	0
90^thp	6.38	11.90	1.75	37.57	41.11	11.61	18.73	9.85	11.21	12.47	0.47	0.10	0.23	0	0	1.13	0.04	0.08
Stdev	5.90	5.79	1.17	13.70	15.10	0	7.70	7.17	5.33	5.33	0.82	0.17	0.63	0	0.11	0.75	0.64	0.34
Prev(%)	100.00	99.50	54.17	100.00	99.47	100.00	100.00	93.75	100.00	99.53	27.48	45.83	25.00	0	9.09	21.43	14.65	26.91

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