HOMD ::Species:Peptostreptococcus stomatis

Species: Peptostreptococcus stomatis (HMT-0112) Primary Body Site: Oral

Full Lineage: Bacteria; Bacillota; Clostridia; Peptostreptococcales; Peptostreptococcaceae; Peptostreptococcus; Peptostreptococcus stomatis

LINKS: Ecology Home | HMT-0112: [Body Sites Data] [Taxon Description] | Life Page: Peptostreptococcus stomatis

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping Eren V1-V3 Eren V3-V5 HMP V1-V3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Species: Peptostreptococcus stomatis

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.03	0.01	0.15	0.01	0.01	0.06	0.13	0.12	0.07	0.08	0	0	0	0.05	0	0	0	0
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0	0	0	0	0	0.06	0.04	0.07	0.01	0.01	0	0	0	0.05	0	0	0	0
90^thp	0.07	0.03	0.34	0.02	0.04	0.06	0.29	0.16	0.16	0.19	0.01	0	0	0.05	0	0	0	0.01
Stdev	0.05	0.04	0.28	0.01	0.02	0	0.11	0.05	0.07	0.08	0.01	0	0	0	0	0	0.03	0.01
Prev(%)	12.50	13.16	29.17	0	0.62	100.00	25.00	85.71	27.27	66.19	1.54	0	0	0	0	0	0	0

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.04	0.01	0.01	0.04	0.21	0.30	0.22	0.21	0.15	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.09	0.03	0.01	0.11	0.51	0.83	0.58	0.54	0.34	0
Stdev	0.12	0.04	0.02	0.08	0.29	0.54	0.26	0.30	0.15	0
Prev(%)	27.27	16.88	11.69	40.26	76.62	63.64	76.62	76.62	74.03	0

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

Notes:
Reads equally close to P. anaerobius and P. stomatis were assigned half to each taxon.

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.02	0.01	0	0.01	0.07	0.09	0.08	0.07	0.04	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.06	0.02	0.01	0.04	0.21	0.24	0.20	0.19	0.12	0
Stdev	0.07	0.02	0.01	0.04	0.10	0.14	0.14	0.11	0.06	0
Prev(%)	31.76	20.27	10.81	34.46	70.95	70.95	73.65	70.95	66.22	1.40

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0	0	0.03	0.22	0.24	0.20	0.25	0.12	0	0	0	0	0.01	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0.07	0.60	0.64	0.54	0.61	0.32	0	0	0	0	0	0	0	0	0
Stdev	0	0	0	0.07	0.34	0.49	0.32	0.48	0.18	0	0	0	0	0.10	0	0	0	0
Prev(%)	0	0	0	34.25	71.81	61.54	72.62	83.33	71.61	0	0	0	0	8.76	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.07	0	0.03	0.08	0.57	0.49	0.40	0.43	0.28	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.21	0	0.09	0.24	1.52	1.27	1.01	1.11	0.71	0	0	0	0	0	0	0	0	0
Stdev	0.17	0	0.08	0.16	0.69	0.75	0.56	0.60	0.31	0	0	0	0	0	0	0	0	0
Prev(%)	41.23	0	20.25	46.90	81.84	83.63	78.19	87.11	82.72	0	0	0	0	0	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.29	0.09	0.07	0.09	0.18	0.94	0.40	0.52	0.33	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0.01	0	0.01	0	0
90^thp	0.29	0.22	0.28	0.35	0.49	1.99	0.62	1.13	0.84	0
Stdev	1.08	0.24	0.12	0.15	0.32	1.89	1.13	1.10	0.66	0
Prev(%)	55.41	55.88	74.42	82.86	85.71	94.00	90.91	90.32	85.00	0

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.02	0.01	0.14	0	0	0	0.02	0.13	0.01	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.06	0.03	0.33	0	0	0	0.06	0.18	0.04	0	0	0	0	0	0	0	0	0
Stdev	0.05	0.05	0.29	0	0.01	0	0.03	0.43	0.03	0.01	0	0	0	0	0	0	0	0
Prev(%)	41.67	19.19	45.83	0	1.86	0	25.00	12.50	16.00	3.76	0	0	0	0	0	0	0	0.18

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