Genus: Phocaeicola
Download OptionsLower rank member(s): [Species:Phocaeicola abscessus] [Species:Phocaeicola dorei] [Species:Phocaeicola massiliensis] [Species:Phocaeicola plebeius] [Species:Phocaeicola vulgatus]
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| Life Page: Phocaeicola
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Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Body Site Legend:
| SUBP-- Subgingival Plaque |
| SUPP -- Supragingival Plaque |
| PERIO -- Periodontal |
| AKE -- Attached Keratinized Gingiva |
| BMU -- Buccal Mucosa |
| HPA -- Hard Palate |
| SAL -- Saliva |
| THR -- Throat |
| PTO -- Palatine Tonsils |
| TDO -- Tongue Dorsum |
| ANA -- Anterior Nares |
| LRC -- L_Retroauricular Crease |
| RRC -- R_Retroauricular Crease |
| LAF -- L_Antecubital Fossa |
| RAF -- R_Antecubital Fossa |
| VIN -- Vaginal Introitus |
| MVA -- Mid Vagina |
| PFO -- Posterior Fornix |
| STO -- Stool |
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Human Microbiome Project Mapping (Data from healthy subjects. - not published)
No Notes
| SUBP | SUPP | PERIO | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | RAF | VIN | MVA | PFO | STO | |
| Avg (%) | 0.03 | 0.03 | 0.14 | 0.05 | 0.06 | 0 | 0.03 | 0.01 | 0.04 | 0.13 | 1.61 | 0.04 | 0.04 | 0.61 | 0.04 | 0.40 | 0.88 | 28.40 |
| n | 24 | 395 | 24 | 15 | 323 | 1 | 8 | 7 | 22 | 423 | 65 | 23 | 30 | 1 | 4 | 8 | 94 | 375 |
| 10thp | 0 | 0 | 0.01 | 0 | 0 | 0 | 0.01 | 0.01 | 0 | 0 | 0 | 0 | 0 | 0.61 | 0.02 | 0 | 0 | 9.91 |
| 90thp | 0.11 | 0.02 | 0.36 | 0.02 | 0.07 | 0 | 0.07 | 0.02 | 0.09 | 0.02 | 2.50 | 0.09 | 0.07 | 0.61 | 0.06 | 0.97 | 0.26 | 46.72 |
| Stdev | 0.05 | 0.28 | 0.24 | 0.16 | 0.26 | 0 | 0.04 | 0.01 | 0.08 | 2.52 | 6.44 | 0.11 | 0.10 | 0 | 0.02 | 1.08 | 4.89 | 15.09 |
| Prev(%) | 0 | 4.05 | 25.00 | 0 | 2.17 | 0 | 0 | 0 | 9.09 | 2.84 | 10.77 | 4.35 | 6.67 | 0 | 0 | 12.50 | 4.26 | 96.80 |
Eren V1-V3 www.pnas.org
(Data from healthy subjects.)
No Notes
Eren V3-V5 www.pnas.org
(Data from healthy subjects.)
No Notes
Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)
No Notes
Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)
No Notes
Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | |
| Avg (%) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| n | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| 10thp | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 90thp | 0.01 | 0 | 0 | 0 | 0 | 0 | 0 | 0.01 | 0 | 0 |
| Stdev | 0.02 | 0.01 | 0 | 0.01 | 0 | 0 | 0.01 | 0 | 0 | 0 |
| Prev(%) | 13.51 | 8.82 | 4.65 | 14.29 | 14.29 | 8.00 | 9.09 | 16.13 | 5.00 | 0 |
Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)
No Notes
| SUBP | SUPP | PERIO | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | RAF | VIN | MVA | PFO | STO | |
| Avg (%) | 0.01 | 0.02 | 0.11 | 0.51 | 0.06 | 0 | 0 | 0.06 | 0.05 | 0.09 | 0.77 | 0.04 | 0.03 | 0.21 | 0.01 | 0.20 | 0.51 | 19.88 |
| n | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| 10thp | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.21 | 0 | 0 | 0 | 4.07 |
| 90thp | 0.07 | 0 | 0.33 | 0.23 | 0.06 | 0 | 0.01 | 0.01 | 0.14 | 0 | 1.25 | 0.15 | 0.14 | 0.21 | 0.03 | 0.03 | 0.13 | 40.31 |
| Stdev | 0.04 | 0.34 | 0.24 | 1.97 | 0.33 | 0 | 0.01 | 0.24 | 0.15 | 1.74 | 3.28 | 0.10 | 0.09 | 0 | 0.04 | 0.75 | 3.42 | 15.23 |
| Prev(%) | 16.67 | 8.84 | 45.83 | 11.77 | 18.35 | 0 | 25.00 | 12.50 | 20.00 | 6.81 | 22.07 | 16.67 | 21.88 | 100.00 | 18.18 | 14.29 | 25.25 | 97.64 |
