HOMD ::Species:Prevotella denticola

Species: Prevotella denticola (HMT-0291) Primary Body Site: Oral

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Full Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; Prevotella denticola

LINKS: Ecology Home | HMT-0291: [Body Sites Data] [Taxon Description] | Life Page: Prevotella denticola

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping Eren V1-V3 Eren V3-V5 HMP V1-V3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Species: Prevotella denticola

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.11	0.05	1.18	0.01	0.03	0.01	0.10	0.07	0.09	0.04	0.01	0	0	0.01	0.01	0	0.13	0.02
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0.01	0	0.01	0	0	0.01	0.05	0.02	0.01	0.01	0	0	0	0.01	0	0	0	0
90^thp	0.19	0.10	3.82	0.03	0.06	0.01	0.17	0.10	0.21	0.08	0.01	0	0	0.01	0.02	0.01	0.03	0.05
Stdev	0.17	0.16	2.90	0.01	0.04	0	0.06	0.04	0.09	0.03	0.02	0	0	0	0.02	0.01	1.21	0.06
Prev(%)	29.17	16.96	33.33	0	2.79	0	12.50	0	4.55	3.55	0	0	0	0	0	0	1.06	0

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

Notes:
reads equally close to P. denticola and P. multiformis were assigned half to each taxon

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.10	0.03	0	0.01	0.01	0.02	0.03	0.12	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.22	0.07	0	0.03	0.01	0.07	0.01	0.05	0	0
Stdev	0.32	0.10	0	0.02	0.05	0.04	0.25	0.54	0.01	0
Prev(%)	42.86	14.29	2.60	24.68	16.88	27.27	18.18	28.57	6.49	1.30

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.65	0.20	0	0.07	0.05	0.14	0.07	0.38	0.01	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	1.41	0.37	0	0.22	0.08	0.42	0.06	0.18	0.03	0
Stdev	2.07	0.71	0.01	0.16	0.28	0.25	0.50	2.81	0.07	0
Prev(%)	51.35	32.43	4.73	44.59	28.38	58.11	23.65	33.11	16.22	0

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.14	0.04	0	0	0	0.04	0.04	0.12	0	0	0	0	0	0	0.28	0.31	0.24	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.38	0.09	0	0	0	0.15	0.03	0.04	0	0	0	0	0	0	0	0	0	0
Stdev	0.44	0.13	0	0	0	0.10	0.30	0.69	0	0	0	0	0	0	2.39	2.70	2.10	0
Prev(%)	46.36	21.85	0	0	0	35.38	19.05	28.00	0	0	0	0	0	0	1.41	2.70	1.32	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.38	0	0	0	0	0.12	0	0.20	0	0	0	0	0	0	0.14	0.15	0.11	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.76	0	0	0	0	0.37	0	0.13	0	0	0	0	0	0	0	0	0	0
Stdev	1.27	0	0	0	0	0.22	0	1.69	0	0	0	0	0	0	1.83	2.06	1.47	0
Prev(%)	50.86	0	0	0	0	53.87	0	30.90	0	0	0	0	0	0	0.57	0.55	0.52	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	1.20	0.32	0.02	0.11	0.02	0.02	0.04	0.07	0.01	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	2.74	0.84	0.03	0.39	0.05	0.08	0.07	0.12	0.01	0
Stdev	3.46	1.03	0.08	0.20	0.03	0.04	0.11	0.22	0.01	0
Prev(%)	63.51	64.71	55.81	80.00	67.86	76.00	81.82	67.74	42.50	0

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.09	0.05	1.38	0	0.02	0	0.03	0	0.02	0	0	0	0	0	0	0	0.20	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.22	0.10	4.39	0	0.06	0	0.09	0	0.02	0	0	0	0	0	0	0	0	0
Stdev	0.20	0.20	3.51	0.01	0.07	0	0.04	0.01	0.07	0.01	0	0	0	0	0	0	2.06	0
Prev(%)	41.67	22.98	33.33	5.88	15.96	0	50.00	6.25	20.00	5.87	0	0	0	0	0	0	1.01	0

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