HOMD ::Species:Prevotella intermedia

Species: Prevotella intermedia (HMT-0643) Primary Body Site: Oral

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Full Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; Prevotella intermedia

LINKS: Ecology Home | HMT-0643: [Body Sites Data] [Taxon Description] | Life Page: Prevotella intermedia

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping Eren V1-V3 Eren V3-V5 HMP V1-V3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Species: Prevotella intermedia

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.41	0.10	0.41	0.01	0.03	0.01	0.21	0.04	1.22	0.02	0.02	0	0	0.06	0.04	0	0.01	0.20
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0.01	0	0.01	0	0	0.01	0.05	0.01	0.01	0.01	0	0	0	0.06	0	0	0	0.08
90^thp	1.17	0.22	0.48	0.02	0.05	0.01	0.49	0.07	0.41	0.04	0.03	0.01	0	0.06	0.11	0.01	0.03	0.33
Stdev	0.87	0.37	0.84	0.01	0.07	0	0.29	0.03	4.71	0.03	0.04	0.01	0	0	0.08	0	0.04	0.11
Prev(%)	25.00	21.27	29.17	0	4.33	0	12.50	0	18.18	8.04	1.54	0	0	0	0	0	0	0.27

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.19	0.01	0	0.01	0	0.02	0.04	0.20	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.05	0	0	0	0	0.04	0.01	0.05	0	0
Stdev	0.97	0.06	0.02	0.05	0.01	0.08	0.25	0.79	0	0
Prev(%)	11.69	5.20	2.60	6.49	2.60	14.29	10.39	14.29	2.60	0

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.73	0.29	0	0.04	0.03	0.15	0.30	0.66	0.01	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	2.86	0.55	0	0.13	0.08	0.44	0.14	0.68	0.01	0
Stdev	2.11	1.14	0.04	0.12	0.08	0.38	1.75	2.38	0.04	0
Prev(%)	31.76	27.03	2.03	22.97	22.30	33.78	24.32	26.35	11.49	0

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.34	0	0	0	0	0.06	0.19	0.79	0	0.01	0	0	0	0.01	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	1.08	0	0	0	0	0.14	0.17	2.25	0	0	0	0	0	0	0	0	0	0
Stdev	1.13	0	0	0	0	0.20	0.84	2.67	0	0.07	0	0	0	0.08	0	0	0	0
Prev(%)	27.82	0	0	0	0	26.92	24.41	29.33	0	5.00	0	0	0	2.77	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.59	0.15	0	0	0	0.14	0.34	0.95	0	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	2.02	0.23	0	0	0	0.42	0.46	2.69	0	0	0	0	0	0	0	0	0	0
Stdev	1.58	0.67	0	0	0	0.36	1.50	3.04	0	0	0	0	0	0	0	0	0	0
Prev(%)	33.33	26.10	0	0	0	37.50	26.17	33.82	0	0	0	0	0	0	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.34	0.04	0.15	0.25	0.11	0.02	0.03	0.99	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.99	0.06	0.22	0.19	0.44	0.06	0.17	0.23	0.01	0
Stdev	1.06	0.15	0.55	0.80	0.23	0.05	0.07	4.80	0.01	0
Prev(%)	43.24	32.35	27.91	45.71	53.57	34.00	36.36	51.61	35.00	0

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.40	0.11	0.31	0	0.03	0	0.20	1.79	1.36	0.01	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	1.31	0.21	0.40	0	0.03	0	0.63	3.53	0.67	0	0	0	0	0	0	0	0	0
Stdev	0.94	0.45	0.90	0	0.18	0	0.42	5.00	5.72	0.03	0.01	0	0	0	0	0	0	0
Prev(%)	29.17	21.46	33.33	0	13.83	0	37.50	25.00	24.00	9.39	1.35	0	0	0	0	0	0	0.18

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