HOMD ::Genus:Riemerella

Genus: Riemerella

Full Lineage: Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales; Weeksellaceae; Riemerella
Lower rank member(s): [Species:Riemerella sp. HMT-322]

LINKS: Ecology Home | Life Page: Riemerella

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
ND:Mapping Eren V1-V3 Eren V3-V5 HMP V1-V3 HMP V3-V5 ND:Metaphlan Dewhirst 35x9

No Available Datasets for Genus: Riemerella

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	1.15	1.61	0.75	0.34	0.21	0.32	0.25	0.33	0.27	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.10	0.17	0.01	0.04	0	0	0	0	0	0
90^thp	2.41	3.42	1.94	0.83	0.42	0.61	0.58	0.93	0.64	0
Stdev	1.07	1.41	0.89	0.37	0.20	0.51	0.37	0.40	0.41	0
Prev(%)	100.00	98.70	89.61	96.10	88.31	80.52	79.22	79.22	79.22	1.30

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.43	0.62	0.25	0.18	0.10	0.20	0.10	0.14	0.11	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.01	0.06	0	0	0	0	0	0	0	0
90^thp	1.10	1.25	0.58	0.44	0.25	0.43	0.28	0.33	0.30	0
Stdev	0.47	0.61	0.36	0.19	0.12	0.18	0.16	0.24	0.23	0
Prev(%)	89.86	94.59	72.97	89.19	77.70	87.16	69.59	75.00	61.49	0

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	1.21	1.47	0.80	0.39	0.19	0.34	0.18	0.30	0.20	0	0.02	0.01	0	0.04	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.10	0.27	0.03	0.01	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	2.79	2.98	2.03	0.92	0.47	0.85	0.46	0.71	0.49	0	0.01	0	0	0.03	0	0	0	0
Stdev	1.83	1.23	0.85	0.40	0.20	0.44	0.30	0.50	0.31	0	0.20	0.08	0	0.21	0	0	0	0
Prev(%)	98.67	100.00	93.71	89.73	82.55	81.54	76.19	88.00	84.52	0	12.36	9.35	0	11.52	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	1.03	1.48	1.18	0.65	0.32	0.39	0.27	0.31	0.24	0	0.07	0.09	0.12	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.10	0.30	0.05	0.12	0	0.03	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	2.47	3.24	2.82	1.40	0.75	0.86	0.67	0.72	0.59	0	0.04	0.04	0.49	0	0	0	0	0
Stdev	1.11	1.28	1.96	0.62	0.34	0.36	0.45	0.39	0.31	0	0.40	0.50	0.34	0	0	0	0	0
Prev(%)	97.78	99.76	93.33	96.53	82.10	91.37	76.32	89.29	84.67	0	15.29	14.81	25.52	0	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.13	0.15	0.04	0.05	0.04	0.03	0.03	0.02	0.02	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0.01	0	0	0	0	0	0	0	0
90^thp	0.28	0.45	0.09	0.11	0.10	0.09	0.04	0.03	0.06	0
Stdev	0.45	0.17	0.08	0.08	0.05	0.04	0.08	0.02	0.03	0
Prev(%)	86.49	97.06	90.70	94.29	89.29	92.00	75.76	83.87	77.50	0

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

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