HOMD ::Species:Saccharimonas sp. HMT-346

Species: Saccharimonas sp. HMT-346 (HMT-0346) Primary Body Site: Oral

Full Lineage: Bacteria; Patescibacteria; Saccharimonadia; Saccharimonadales; Saccharimonadaceae; Saccharimonas; Saccharimonas sp. HMT-346

LINKS: Ecology Home | HMT-0346: [Body Sites Data] [Taxon Description] | Life Page: Saccharimonas sp. HMT-346

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping Eren V1-V3 ND:Erenv3v5 HMP V1-V3 HMP V3-V5 ND:Metaphlan Dewhirst 35x9

No Available Datasets for Species: Saccharimonas sp. HMT-346

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	1.13	0.51	4.15	0.01	0.04	0	0.40	0.01	0.02	0.02	0.01	0	0	0.02	0	0	0	0
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0.04	0	0.04	0	0	0	0.05	0	0	0	0	0	0	0.02	0	0	0	0
90^thp	1.85	1.28	7.80	0.03	0.07	0	0.86	0.01	0.03	0.02	0.02	0.01	0	0.02	0	0	0	0
Stdev	2.47	1.23	6.61	0.03	0.16	0	0.85	0	0.05	0.32	0.03	0	0	0	0	0	0	0
Prev(%)	70.83	53.42	83.33	0	4.95	0	25.00	0	4.55	6.15	0	0	0	0	0	0	0	0

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.44	0.33	0	0.02	0.01	0.22	0.02	0.14	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	1.86	0.85	0	0.04	0.03	0.72	0	0.02	0	0
Stdev	0.95	1.06	0	0.04	0.04	0.49	0.14	1.17	0.01	0.01
Prev(%)	49.35	31.17	5.20	25.97	15.58	49.35	9.09	12.99	6.49	1.30

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.59	0.25	0.08	0.02	0.02	0.27	0.02	0.11	0	0	0.01	0.01	0.03	0.01	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	1.71	0.96	0.01	0.04	0.05	0.80	0.03	0.03	0	0	0	0	0	0	0	0	0	0
Stdev	1.16	0.57	0.76	0.05	0.04	0.53	0.16	0.72	0	0	0.07	0.08	0.23	0.07	0	0	0	0
Prev(%)	69.54	54.97	13.99	28.77	26.17	63.08	18.75	22.00	0	0	4.60	3.40	6.32	1.84	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.03	0.02	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.06	0.05	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Stdev	0.07	0.05	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Prev(%)	39.26	31.71	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	1.10	0.99	0.02	0.05	0.01	0.02	0.01	0.05	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	2.75	1.46	0.05	0.14	0.02	0.04	0.01	0.01	0.01	0
Stdev	2.73	2.97	0.06	0.12	0.02	0.04	0.01	0.22	0.01	0
Prev(%)	81.08	91.18	46.51	77.14	53.57	74.00	51.52	48.39	17.50	0

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

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