HOMD ::Species:Segatella oris

Species: Segatella oris (HMT-0311) Primary Body Site: Oral

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Full Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Prevotellaceae; Segatella; Segatella oris

LINKS: Ecology Home | HMT-0311: [Body Sites Data] [Taxon Description] | Life Page: Segatella oris

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping Eren V1-V3 Eren V3-V5 HMP V1-V3 HMP V3-V5 ND:Metaphlan Dewhirst 35x9

No Available Datasets for Species: Segatella oris

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.62	0.15	0.98	0.03	0.04	0	0.35	0.06	0.47	0.03	0.01	0	0	0.07	0	0	0	0
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0.09	0	0.02	0	0	0	0.20	0.03	0.01	0.01	0	0	0	0.07	0	0	0	0
90^thp	1.48	0.37	1.98	0.06	0.11	0	0.56	0.09	1.16	0.06	0.01	0	0	0.07	0.01	0.01	0.01	0.01
Stdev	0.64	0.31	1.60	0.03	0.06	0	0.16	0.03	0.85	0.03	0.01	0.01	0	0	0.01	0.01	0.01	0.01
Prev(%)	87.50	50.38	66.67	13.33	5.57	0	62.50	0	54.55	10.40	0	0	0	0	0	0	0	0

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.97	0.19	0	0.09	0.03	0.29	0.15	0.42	0.01	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	2.80	0.56	0	0.26	0.09	0.68	0.30	1.46	0.02	0
Stdev	1.80	0.39	0.01	0.24	0.07	0.41	0.45	0.87	0.04	0
Prev(%)	74.03	57.14	9.09	50.65	35.06	79.22	42.86	64.94	19.48	1.30

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	2.36	0.56	0.01	0.26	0.11	0.69	0.18	0.70	0.04	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.03	0	0	0	0	0.04	0	0	0	0
90^thp	7.70	1.60	0.03	0.40	0.19	1.80	0.27	1.45	0.06	0
Stdev	3.83	1.34	0.04	1.04	0.65	0.75	0.85	2.00	0.14	0
Prev(%)	91.22	75.68	12.84	72.97	52.03	92.57	60.13	77.03	35.81	0.70

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.97	0.17	0.06	0	0	0.32	0	0.58	0	0	0.01	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	2.75	0.57	0.03	0	0	0.81	0	2.43	0	0	0	0	0	0	0	0	0	0
Stdev	1.60	0.36	0.52	0	0	0.46	0	1.09	0	0	0.04	0	0	0.03	0	0	0	0
Prev(%)	84.11	66.22	23.78	0	0	78.46	0	75.33	0	0	8.05	0	0	5.07	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	1.66	0.28	0	0.22	0	0.61	0.32	0.90	0	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0.02	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	4.33	0.80	0	0.57	0	1.48	0.56	2.81	0	0	0	0	0	0	0	0	0	0
Stdev	3.03	0.57	0	0.44	0	0.79	1.04	1.95	0	0	0	0	0	0	0	0	0	0
Prev(%)	88.89	65.85	0	63.27	0	90.18	53.27	78.10	0	0	0	0	0	0	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	2.56	0.27	0.06	0.23	0.06	0.05	0.06	0.54	0.01	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.01	0	0	0	0	0	0	0	0	0
90^thp	7.45	0.80	0.25	0.68	0.13	0.12	0.16	2.02	0.02	0
Stdev	5.14	0.47	0.11	0.44	0.07	0.06	0.08	1.21	0.01	0
Prev(%)	94.59	88.23	62.79	91.43	82.14	84.00	87.88	83.87	50.00	0

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

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