HOMD ::Family:Selenomonadaceae

Family: Selenomonadaceae

Full Lineage: Bacteria; Bacillota; Negativicutes; Selenomonadales; Selenomonadaceae
Lower rank member(s): [Genus:Centipeda] [Genus:Mitsuokella] [Genus:Selenomonadaceae [G1]] [Genus:Selenomonas]

LINKS: Ecology Home | Life Page: Selenomonadaceae

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping Eren V1-V3 Eren V3-V5 HMP V1-V3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Family: Selenomonadaceae

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	1.16	1.09	4.98	0.34	0.12	0.23	0.88	0.85	0.94	0.37	0.08	0.01	0	0.06	0	0.24	0.01	0.01
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0.19	0.02	0.86	0.01	0	0.23	0.09	0.07	0.02	0.01	0	0	0	0.06	0	0	0	0
90^thp	2.18	3.27	9.16	0.91	0.26	0.23	2.05	2.12	3.26	0.90	0.15	0.01	0.01	0.06	0	0.59	0.02	0.02
Stdev	0.84	1.46	3.54	0.52	0.36	0	0.83	0.97	1.73	0.60	0.27	0.01	0	0	0	0.66	0.03	0.03
Prev(%)	87.50	75.95	91.67	40.00	8.98	100.00	50.00	85.71	45.45	77.30	3.08	0	0	0	0	12.50	0	0.53

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	1.26	0.91	0.04	0.08	0.24	2.96	1.27	0.98	0.37	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0.23	0	0.01	0	0
90^thp	3.79	2.37	0.09	0.23	0.57	7.72	3.14	3.08	0.86	0
Stdev	1.92	1.66	0.13	0.10	0.39	3.39	1.96	2.11	0.86	0
Prev(%)	83.12	79.22	32.47	57.14	79.22	97.40	88.31	89.61	75.33	1.30

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	2.53	1.99	0.23	0.19	0.26	3.29	1.02	0.91	0.24	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.09	0.05	0	0	0	0.28	0.04	0.01	0	0
90^thp	5.44	5.49	0.42	0.58	0.69	9.00	2.74	2.67	0.68	0
Stdev	2.44	2.14	0.86	0.28	0.33	4.08	1.41	1.66	0.38	0
Prev(%)	97.97	93.92	41.89	76.35	85.14	99.32	95.27	90.54	76.35	0.70

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	1.73	0.89	0.28	0	0.15	2.36	1.02	1.00	0.25	0	0	0	0.04	0.04	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.02	0	0	0	0	0.12	0	0.01	0	0	0	0	0	0	0	0	0	0
90^thp	4.38	2.60	0.34	0	0.40	5.84	2.59	2.66	0.68	0	0	0	0	0	0	0	0	0
Stdev	2.12	1.40	1.76	0	0.30	2.83	2.03	1.75	0.38	0	0	0	0.44	0.20	0	0	0	0
Prev(%)	94.04	84.77	44.06	0	70.47	93.08	88.99	90.00	79.36	0	0	0	8.05	6.45	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	2.42	1.38	0.43	0.20	0.49	4.56	1.77	1.51	0.46	0.02	0.03	0.06	0.26	0.21	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.10	0.02	0	0	0	0.31	0.04	0.04	0	0	0	0	0	0	0	0	0	0
90^thp	5.87	3.92	0.83	0.50	1.39	11.88	4.34	3.90	1.26	0.05	0.03	0.06	0.49	0.47	0	0	0	0
Stdev	2.50	1.82	1.81	0.46	0.73	5.73	3.04	2.72	0.84	0.17	0.17	0.29	1.01	0.61	0	0.03	0	0.06
Prev(%)	97.04	91.95	48.64	60.79	82.35	98.51	92.52	93.19	82.00	14.18	14.65	15.43	28.28	23.33	0	3.83	0	0.24

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.97	1.50	0.07	0.12	0.06	0.09	0.23	0.22	0.05	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.01	0.08	0	0	0	0	0.01	0.01	0	0
90^thp	2.66	4.16	0.26	0.41	0.10	0.26	0.85	0.43	0.20	0
Stdev	1.31	1.89	0.11	0.25	0.12	0.12	0.40	0.43	0.08	0
Prev(%)	93.24	97.06	76.74	82.86	85.71	86.00	93.94	93.55	85.00	10.00

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	1.00	1.08	4.67	0.06	0.10	0.32	0.78	0.59	0.99	0.36	0.01	0	0	0	0	0.16	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.12	0	0.94	0	0	0.32	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	2.12	3.25	8.33	0.17	0.23	0.32	2.07	1.64	3.51	0.93	0	0	0	0	0	0	0	0
Stdev	0.85	1.47	3.18	0.14	0.36	0	0.97	1.01	1.93	0.61	0.11	0	0	0	0	0.59	0.01	0.01
Prev(%)	95.83	85.61	95.83	23.53	33.24	100.00	75.00	68.75	76.00	84.74	1.35	0	0	0	0	7.14	0.51	1.64

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