HOMD ::Species:Streptococcus cristatus

Species: Streptococcus cristatus (HMT-0578) Primary Body Site: Oral

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Full Lineage: Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus cristatus

LINKS: Ecology Home | HMT-0578: [Body Sites Data] [Taxon Description] | Life Page: Streptococcus cristatus

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping Eren V1-V3 Eren V3-V5 ND:HMPv1v3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Species: Streptococcus cristatus

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.27	0.40	0.29	0.32	0.38	0.14	0.33	0.02	0.09	0.04	0.01	0.01	0.01	0.29	0	0.06	0.01	0
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0.11	0.11	0.01	0.18	0.17	0.14	0.05	0.01	0.01	0.01	0	0	0	0.29	0	0	0	0
90^thp	0.49	0.82	0.70	0.45	0.63	0.14	0.63	0.04	0.06	0.06	0.03	0.03	0.01	0.29	0.01	0.15	0.03	0
Stdev	0.21	0.38	0.35	0.12	0.24	0	0.39	0.01	0.24	0.02	0.02	0.02	0.01	0	0	0.15	0.03	0.01
Prev(%)	70.83	83.54	50.00	46.67	35.60	0	37.50	14.29	9.09	14.89	1.54	0	0	0	0	12.50	0	0

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

Notes:
combined from subspecies

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.69	0.76	4.79	4.67	3.29	0.79	1.42	1.62	0.62	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.13	0.20	2.60	2.18	1.22	0.17	0.17	0.21	0.15	0
90^thp	1.48	1.62	6.88	7.26	5.89	1.45	3.65	4.43	1.35	0.01
Stdev	0.94	0.57	1.80	1.91	1.77	0.58	1.51	1.79	0.49	0
Prev(%)	100.00	100.00	100.00	100.00	100.00	97.40	100.00	100.00	100.00	49.35

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

Notes:
combined from subspecies

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.10	0.10	0.03	0.20	0.56	0.35	0.55	0.49	1.00	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0.02	0.10	0.06	0.12	0.09	0.19	0
90^thp	0.18	0.28	0.10	0.49	1.08	0.69	1.12	0.97	2.05	0
Stdev	0.39	0.16	0.07	0.24	0.52	0.36	0.46	0.47	1.00	0.01
Prev(%)	79.73	87.16	56.08	99.32	100.00	100.00	99.32	97.97	100.00	16.78

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.02	0.07	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.04	0.13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Stdev	0.10	0.22	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Prev(%)	28.64	50.24	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

Notes:
combined from subspecies

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	1.42	2.21	3.22	4.06	2.59	1.32	1.84	1.22	1.93	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.05	0.31	0.20	0.55	0.30	0.29	0.20	0.10	0.12	0
90^thp	3.40	5.37	4.72	7.96	4.59	2.73	5.28	3.35	6.61	0
Stdev	2.45	1.83	6.83	4.88	4.23	1.70	2.39	1.68	3.53	0.01
Prev(%)	100.00	100.00	100.00	100.00	100.00	100.00	100.00	96.77	100.00	10.00

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.14	0.30	0.25	0.08	0.20	0	0.35	0	0.06	0	0	0	0	0	0	0.02	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.39	0.81	0.66	0.25	0.60	0	0.81	0	0.01	0.02	0	0	0	0	0	0	0	0
Stdev	0.15	0.47	0.37	0.11	0.39	0	0.61	0.01	0.28	0.01	0.01	0	0	0	0	0.09	0.01	0.01
Prev(%)	75.00	78.03	75.00	41.18	55.32	0	62.50	6.25	12.00	12.68	0.45	0	0	0	0	7.14	0.51	0.36

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