HOMD ::Species:Streptococcus infantis

Species: Streptococcus infantis

Full Lineage: Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus infantis
Lower rank member(s): [Subspecies:clade-061] [Subspecies:clade-431] [Subspecies:clade-444] [Subspecies:clade-638]

LINKS: Ecology Home | Life Page: Streptococcus infantis

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping Eren V1-V3 Eren V3-V5 ND:HMPv1v3 ND:HMPv3v5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Species: Streptococcus infantis

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

Notes:
has subspecies

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.25	0.29	0.11	1.62	2.85	9.27	2.56	3.21	2.26	3.60	0.20	0.05	0.03	1.79	0	0.07	0.04	0.04
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0.10	0.08	0.01	0.71	1.36	9.27	1.67	1.60	0.61	1.38	0.02	0	0	1.79	0	0	0	0
90^thp	0.34	0.51	0.26	2.42	4.38	9.27	3.36	4.98	4.03	6.34	0.30	0.12	0.05	1.79	0.01	0.16	0.06	0.03
Stdev	0.28	0.40	0.12	0.66	1.47	0	0.83	1.51	1.38	2.14	0.58	0.06	0.07	0	0	0.10	0.22	0.35
Prev(%)	12.50	41.01	8.33	73.33	85.76	100.00	100.00	100.00	90.91	99.76	3.08	0	0	0	0	12.50	1.06	1.07

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

Notes:
combined from subspecies

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	1.72	2.13	5.35	5.84	4.92	1.74	2.18	2.35	1.95	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.33	0.55	2.96	3.46	2.09	0.36	0.42	0.41	0.40	0
90^thp	3.82	4.59	8.06	7.79	7.37	3.49	5.28	5.99	4.64	0.01
Stdev	1.42	1.60	2.03	1.80	2.61	1.40	1.82	2.04	1.54	0.01
Prev(%)	100.00	100.00	100.00	100.00	100.00	97.40	100.00	100.00	100.00	54.55

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

Notes:
combined from subspecies

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	1.09	1.38	11.18	12.45	11.05	2.50	5.47	4.62	2.69	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.14	0.27	2.94	4.94	2.70	0.71	0.82	0.56	0.79	0
90^thp	2.11	2.23	21.68	23.65	23.09	4.73	12.53	9.70	5.37	0.01
Stdev	1.54	2.17	8.39	7.31	8.20	1.68	5.66	5.13	1.94	0.01
Prev(%)	100.00	100.00	100.00	100.00	100.00	100.00	100.00	100.00	100.00	18.88

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

Notes:
combined from subspecies

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	1.02	1.38	6.06	6.81	5.92	7.63	4.54	4.70	4.35	0.06
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.04	0.35	1.68	2.12	1.39	1.11	0.87	1.11	0.73	0
90^thp	2.92	2.46	11.94	11.77	10.27	13.33	7.55	9.36	7.58	0.14
Stdev	1.26	1.18	4.10	3.82	3.55	7.30	3.02	3.32	3.21	0.15
Prev(%)	100.00	100.00	100.00	100.00	100.00	100.00	100.00	100.00	100.00	45.00

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

Notes:
has subspecies

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.07	0.07	0.01	0.08	0.96	2.26	1.20	0.75	1.03	2.25	0.02	0	0	0	0	0	0.02	0.01
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0.02	2.26	0.35	0	0.02	0.49	0	0	0	0	0	0	0	0
90^thp	0.07	0.15	0.01	0.18	2.15	2.26	1.91	1.60	2.84	4.62	0	0.01	0	0	0	0	0	0
Stdev	0.30	0.26	0.03	0.23	1.95	0	0.66	0.65	1.21	1.97	0.18	0.01	0	0	0	0.01	0.19	0.11
Prev(%)	37.50	54.04	16.67	29.41	90.96	100.00	100.00	75.00	88.00	99.30	4.05	12.50	6.25	0	0	7.14	3.03	1.82

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