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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

Subspecies: clade-034 (HMT-0034) Primary Body Site: Nasal

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Oral:
SUBP-- Subgingival Plaque
SUPP -- Supragingival Plaque
PERIO -- Periodontal
AKE -- Attached Keratinized Gingiva
BMU -- Buccal Mucosa
HPA -- Hard Palate
SAL -- Saliva
THR -- Throat
PTO -- Palatine Tonsils
TDO -- Tongue Dorsum
Nasal:
ANA -- Anterior Nares
Skin:
LRC -- L_Retroauricular Crease
RRC -- R_Retroauricular Crease
LAF -- L_Antecubital Fossa
RAF -- R_Antecubital Fossa
Vaginal:
VIN -- Vaginal Introitus
MVA -- Mid Vagina
PFO -- Posterior Fornix
Gut:
STO -- Stool

Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Available Datasets:
 HMP Mapping  ND:Erenv1v3  ND:Erenv3v5  HMP V1-V3  ND:HMPv3v5  ND:Metaphlan  Dewhirst 35x9
No Available Datasets for Subspecies: clade-034
Human Microbiome Project Mapping (Data from healthy subjects. - not published)
No Notes

SUBPSUPPPERIOAKEBMUHPASALTHRPTOTDOANALRCRRCRAFVINMVAPFOSTO
Avg (%)00000000000.050.010.010.020000
n2439524153231872242365233014894375
10thp00000000000000.020000
90thp00000000000.100.030.010.020000
Stdev00000000000.080.020.0100000
Prev(%)000000000000000000
Eren V1-V3 www.pnas.org (Data from healthy subjects.)
No Notes

Eren V3-V5 www.pnas.org (Data from healthy subjects.)
No Notes

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)
No Notes

SUBPSUPPAKEBMUHPASALTHRPTOTDOANALRCRRCLAFRAFVINMVAPFOSTO
Avg (%)00000000000.0400.150.130000
nNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaN
10thp000000000000000000
90thp00000000000.0200.380.250000
Stdev00000000000.3000.430.480000
Prev(%)000000000013.51034.4824.890000
Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)
Notes:
No data – the v3v5 region of the 16S rRNA gene does not distinguish this species from its close relatives.


Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)
No Notes

SUBPSUPPAKEBMUHPASALTHRPTOTDOANA
Avg (%)0000000000.01
nNaNNaNNaNNaNNaNNaNNaNNaNNaNNaN
10thp0000000000
90thp0000000000
Stdev0000000000.05
Prev(%)0000000005.00
Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)
No Notes