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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2
Taxon Table | Genome Table

Staphylococcus capitis (HMT-0116)

Bacteria;Bacillota;Bacilli;Caryophanales;Staphylococcaceae;Staphylococcus capitis

Taxon Description:
Classification:
Bracketed letters indicate
that the taxonomic name at this
level has not been established.
  • Examples:
  • C1 – First Unnamed Class
  • O1 – First Unnamed Order
  • F2 – Second Unnamed Family
  • G3 – Third Unnamed Genus
Domain: Bacteria
Phylum: Bacillota
Class: Bacilli
Order: Caryophanales
Family: Staphylococcaceae
Genus: Staphylococcus
Species:capitis
Bacterial Name: Staphylococcus capitis
Naming Status: Named
Cultivation Status: Cultivated
Body Site (or Source):
  [View in Body Sites Table] 		Primary: Skin (Abundance: medium)
Secondary: Nasal (Abundance: medium)
Note: Skin
Reason: Metagenomic mapping data, HMP (Torres-Morales et al. 2026)
Type/Reference Strain:
Former Names or Synonyms:
Phylum: Firmicutes
16S rRNA RefSeq Tree: View Taxon in RefSeq Tree
16S rRNA Reference Sequences:
     RefSeq-ID(s)
HMT-116_16S000903 Show Sequence
HMT-116_16S000966 Show Sequence
HMT-116_16S001001 Show Sequence
HMT-116_16S001005 Show Sequence
HMT-116_16S001046 Show Sequence
HMT-116_16S001056 Show Sequence
HMT-116_16S001058 Show Sequence
HMT-116_16S001062 Show Sequence
HMT-116_16S001074 Show Sequence
HMT-116_16S001083 Show Sequence
HMT-116_16S001090 Show Sequence
HMT-116_16S001092 Show Sequence
HMT-116_16S001094 Show Sequence
HMT-116_16S001118 Show Sequence
HMT-116_16S001126 Show Sequence
HMT-116_16S001138 Show Sequence
HMT-116_16S001142 Show Sequence
HMT-116_16S001150 Show Sequence
HMT-116_16S001188 Show Sequence
HMT-116_16S001213 Show Sequence
HMT-116_16S001217 Show Sequence
HMT-116_16S001250 Show Sequence
HMT-116_16S001252 Show Sequence
HMT-116_16S001276 Show Sequence
HMT-116_16S001277 Show Sequence
HMT-116_16S001280 Show Sequence
HMT-116_16S001283 Show Sequence
HMT-116_16S001287 Show Sequence
HMT-116_16S001288 Show Sequence
HMT-116_16S001302 Show Sequence
HMT-116_16S001309 Show Sequence
HMT-116_16S001325 Show Sequence
HMT-116_16S001329 Show Sequence
HMT-116_16S001341 Show Sequence
HMT-116_16S001353 Show Sequence
HMT-116_16S001424 Show Sequence
HMT-116_16S001442 Show Sequence
HMT-116_16S001468 Show Sequence
HMT-116_16S001582 Show Sequence
HMT-116_16S001648 Show Sequence
HMT-116_16S001716 Show Sequence
HMT-116_16S001814 Show Sequence
HMT-116_16S006131 Show Sequence
HMT-116_16S006395 Show Sequence
HMT-116_16S006655 Show Sequence
HMT-116_16S006657 Show Sequence

Download latest 16S rRNA reference gene sequences.
No Images Available
Number of
Genome Sequences:		 100 Open Genomes in Table
Pangenome(s): No Pangenomes Available.
Microbial Ecology: Abundance/Prevalence
Proteomics:
NCBI Taxon ID: 29388 [Link to NCBI]
LPSN.dsmz.de: https://lpsn.dsmz.de/species/Staphylococcus-capitis
PubMed Searches:
NCBI PubMed Link
NCBI (Entrez) Nucleotide Link
NCBI (Entrez) Protein Link
Phylogenetic Trees:
Genome Tree
Ribosomal Protein Tree
16S rRNA Gene Tree