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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2
Taxon Table | Genome Table

Capnocytophaga ochracea (HMT-0700)

Bacteria;Bacteroidota;Flavobacteriia;Flavobacteriales;Flavobacteriaceae;Capnocytophaga ochracea

Taxon Description:
Classification:
Bracketed letters indicate
that the taxonomic name at this
level has not been established.
  • Examples:
  • C1 – First Unnamed Class
  • O1 – First Unnamed Order
  • F2 – Second Unnamed Family
  • G3 – Third Unnamed Genus
Domain: Bacteria
Phylum: Bacteroidota
Class: Flavobacteriia
Order: Flavobacteriales
Family: Flavobacteriaceae
Genus: Capnocytophaga
Species:ochracea
Bacterial Name: Capnocytophaga ochracea
Naming Status: Named
Cultivation Status: Cultivated
Body Site (or Source):
  [View in Body Sites Table] 		Primary: Oral (Abundance: medium)
Note: Subgingival plaque
Reason: Metagenomic mapping data, HMP (Torres-Morales et al. 2026)
Type/Reference Strain:
Former Names or Synonyms:
Bacteroides ochraceus
Fusiformis nucleatus
Phylum: Bacteroidetes
Ristella ochraceus
16S rRNA RefSeq Tree: View Taxon in RefSeq Tree
16S rRNA Reference Sequences:
     RefSeq-ID(s)
HMT-700_16S004968 Show Sequence
HMT-700_16S004971 Show Sequence
HMT-700_16S004999 Show Sequence
HMT-700_16S005008 Show Sequence
HMT-700_16S005049 Show Sequence
HMT-700_16S005085 Show Sequence
HMT-700_16S005124 Show Sequence
HMT-700_16S005152 Show Sequence
HMT-700_16S005193 Show Sequence
HMT-700_16S005205 Show Sequence
HMT-700_16S005232 Show Sequence
HMT-700_16S005306 Show Sequence
HMT-700_16S005307 Show Sequence
HMT-700_16S005320 Show Sequence
HMT-700_16S005327 Show Sequence
HMT-700_16S005418 Show Sequence
HMT-700_16S005426 Show Sequence
HMT-700_16S005435 Show Sequence
HMT-700_16S005437 Show Sequence
HMT-700_16S005440 Show Sequence
HMT-700_16S005448 Show Sequence
HMT-700_16S005451 Show Sequence
HMT-700_16S005456 Show Sequence
HMT-700_16S005458 Show Sequence
HMT-700_16S005461 Show Sequence
HMT-700_16S005496 Show Sequence
HMT-700_16S006107 Show Sequence
HMT-700_16S006214 Show Sequence
HMT-700_16S006217 Show Sequence
HMT-700_16S006220 Show Sequence
HMT-700_16S006221 Show Sequence
HMT-700_16S006226 Show Sequence
HMT-700_16S006242 Show Sequence
HMT-700_16S006244 Show Sequence
HMT-700_16S006245 Show Sequence
HMT-700_16S006570 Show Sequence
HMT-700_16S006571 Show Sequence
HMT-700_16S006725 Show Sequence

Download latest 16S rRNA reference gene sequences.
species/Capno_256x256.png Capnocytophaga (cyan) shown in a hedgehog structure from human dental plaque. They occupy the area between the Corynebacterium (magenta) at the center and the Streptococcus (green) in the outer ring.
See Mark Welch et al. 2016
Number of
Genome Sequences:		 24 Open Genomes in Table
Pangenome(s): No Pangenomes Available.
Microbial Ecology: Abundance/Prevalence
Proteomics:
NCBI Taxon ID: 1018 [Link to NCBI]
LPSN.dsmz.de: https://lpsn.dsmz.de/species/Capnocytophaga-ochracea
PubMed Searches:
NCBI PubMed Link
NCBI (Entrez) Nucleotide Link
NCBI (Entrez) Protein Link
Phylogenetic Trees:
Genome Tree
Ribosomal Protein Tree
16S rRNA Gene Tree