HOMD Banner
Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

BAKTAGenome Explorer: Prevotella bivia (GCA_000759165.1)

Select a Genome:
BAKTA Annotations for GCA_000759165.1
Genome Selected: Prevotella bivia
ContigsBases CDSrRNA tmRNAtRNA
173 2408181 2060 3 1 41
[Table]   [AA Fasta]      [Browser]   [Text]   [Excel]  
Search & Sort all 4224 Records
Search These Records: Clear
Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:9]    |    Number of Records Found: 4224 [9 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  7  8  9  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 BAKTA
Gene		 BAKTA
GeneProduct
4001 JRNM01000110.1 GCA000759165_01996 gene open 2298-3869 thiC
4002 JRNM01000110.1 GCA000759165_01997 gene open 3874-4494
4003 JRNM01000110.1 GCA000759165_01998 gene open 4491-5306
4004 JRNM01000110.1 GCA000759165_01999 gene open 5616-5867
4005 JRNM01000110.1 GCA000759165_02000 gene open 6046-6118 trnfM
4006 JRNM01000110.1 GCA000759165_02000 tRNA open 6046-6118 trnfM tRNA-fMet(cat)
4007 JRNM01000111.1 GCA000759165_02001 CDS open 1159-1419 _na     86_aa Toxin-antitoxin system%2C antitoxin component%2C Xre domain protein
4008 JRNM01000111.1 GCA000759165_02002 CDS open 1532-2212 _na     226_aa Outer membrane protein/peptidoglycan-associated (Lipo)protein
4009 JRNM01000111.1 GCA000759165_02003 CDS open 2434-3915 _na     493_aa proS proline--tRNA ligase
4010 JRNM01000111.1 GCA000759165_02004 CDS open 3995-4921 _na     308_aa hypothetical protein
4011 JRNM01000111.1 GCA000759165_02005 CDS open 5076-5948 _na     290_aa rpoD RNA polymerase sigma-70 domain-containing protein
4012 JRNM01000111.1 GCA000759165_02001 gene open 1159-1419
4013 JRNM01000111.1 GCA000759165_02002 gene open 1532-2212
4014 JRNM01000111.1 GCA000759165_02003 gene open 2434-3915 proS
4015 JRNM01000111.1 GCA000759165_02004 gene open 3995-4921
4016 JRNM01000111.1 GCA000759165_02005 gene open 5076-5948 rpoD
4017 JRNM01000112.1 GCA000759165_02006 CDS open 127-1161 _na     344_aa Endolytic murein transglycosylase
4018 JRNM01000112.1 GCA000759165_02007 CDS open 1280-1921 _na     213_aa Haloacid dehalogenase superfamily enzyme%2C subfamily IA
4019 JRNM01000112.1 GCA000759165_02008 CDS open 1990-2178 _na     62_aa hypothetical protein
4020 JRNM01000112.1 GCA000759165_02009 CDS open 2450-3412 _na     320_aa K+dependent Na+ exchanger related-protein
4021 JRNM01000112.1 GCA000759165_02010 CDS open 3500-5722 _na     740_aa RelA/SpoT family protein
4022 JRNM01000112.1 GCA000759165_02006 gene open 127-1161
4023 JRNM01000112.1 GCA000759165_02007 gene open 1280-1921
4024 JRNM01000112.1 GCA000759165_02008 gene open 1990-2178
4025 JRNM01000112.1 GCA000759165_02009 gene open 2450-3412
4026 JRNM01000112.1 GCA000759165_02010 gene open 3500-5722
4027 JRNM01000113.1 GCA000759165_02011 CDS open 72-410 _na     112_aa hypothetical protein
4028 JRNM01000113.1 GCA000759165_02012 CDS open 476-3058 _na     860_aa Xanthan lyase
4029 JRNM01000113.1 GCA000759165_02013 CDS open 3060-3605 _na     181_aa Acyltransferase
4030 JRNM01000113.1 GCA000759165_02014 CDS open 3624-3896 _na     90_aa rteC RteC protein
4031 JRNM01000113.1 GCA000759165_02015 CDS open 4097-5740 _na     547_aa pfkA diphosphate--fructose-6-phosphate 1-phosphotransferase
4032 JRNM01000113.1 GCA000759165_02011 gene open 72-410
4033 JRNM01000113.1 GCA000759165_02012 gene open 476-3058
4034 JRNM01000113.1 GCA000759165_02013 gene open 3060-3605
4035 JRNM01000113.1 GCA000759165_02014 gene open 3624-3896 rteC
4036 JRNM01000113.1 GCA000759165_02015 gene open 4097-5740 pfkA
4037 JRNM01000114.1 GCA000759165_02016 CDS open 30-2189 _na     719_aa Membrane protein
4038 JRNM01000114.1 GCA000759165_02017 CDS open 2327-3598 _na     423_aa ATPase%2C AAA family
4039 JRNM01000114.1 GCA000759165_02018 CDS open 3626-4585 _na     319_aa Lactate dehydrogenase-like oxidoreductase
4040 JRNM01000114.1 GCA000759165_02019 CDS open 4607-5251 _na     214_aa Glycine transporter domain-containing protein
4041 JRNM01000114.1 GCA000759165_02016 gene open 30-2189
4042 JRNM01000114.1 GCA000759165_02017 gene open 2327-3598
4043 JRNM01000114.1 GCA000759165_02018 gene open 3626-4585
4044 JRNM01000114.1 GCA000759165_02019 gene open 4607-5251
4045 JRNM01000114.1 GCA000759165_02020 gene open 5347-5420 trnR
4046 JRNM01000114.1 GCA000759165_02020 tRNA open 5347-5420 trnR tRNA-Arg(acg)
4047 JRNM01000115.1 GCA000759165_02021 CDS open 116-910 _na     264_aa 3-oxoacyl-[acyl-carrier-protein] synthase III C-terminal domain-containing protein
4048 JRNM01000115.1 GCA000759165_02022 CDS open 1148-1366 _na     72_aa Natural product
4049 JRNM01000115.1 GCA000759165_02023 CDS open 1435-2685 _na     416_aa Radical SAM additional 4Fe4S-binding domain protein
4050 JRNM01000115.1 GCA000759165_02024 CDS open 2682-4979 _na     765_aa Outer membrane protein beta-barrel domain-containing protein
4051 JRNM01000115.1 GCA000759165_02021 gene open 116-910
4052 JRNM01000115.1 GCA000759165_02022 gene open 1148-1366
4053 JRNM01000115.1 GCA000759165_02023 gene open 1435-2685
4054 JRNM01000115.1 GCA000759165_02024 gene open 2682-4979
4055 JRNM01000116.1 GCA000759165_02025 CDS open 318-545 _na     75_aa HTH cro/C1-type domain-containing protein
4056 JRNM01000116.1 GCA000759165_02026 CDS open 638-2242 _na     534_aa ATPase AAA-type core domain-containing protein
4057 JRNM01000116.1 GCA000759165_02027 CDS open 2267-3094 _na     275_aa DUF4357 domain-containing protein
4058 JRNM01000116.1 GCA000759165_02028 CDS open 3110-3592 _na     160_aa Phage holin%2C LL-H family
4059 JRNM01000116.1 GCA000759165_02025 gene open 318-545
4060 JRNM01000116.1 GCA000759165_02026 gene open 638-2242
4061 JRNM01000116.1 GCA000759165_02027 gene open 2267-3094
4062 JRNM01000116.1 GCA000759165_02028 gene open 3110-3592
4063 JRNM01000117.1 GCA000759165_02029 CDS open 227-3145 _na     972_aa TonB-dependent receptor
4064 JRNM01000117.1 GCA000759165_02030 CDS open 3208-4737 _na     509_aa Lipoprotein
4065 JRNM01000117.1 GCA000759165_02029 gene open 227-3145
4066 JRNM01000117.1 GCA000759165_02030 gene open 3208-4737
4067 JRNM01000118.1 GCA000759165_02031 CDS open 63-428 _na     121_aa Outer membrane insertion signal domain protein
4068 JRNM01000118.1 GCA000759165_02032 CDS open 650-2956 _na     768_aa peptidoglycan glycosyltransferase
4069 JRNM01000118.1 GCA000759165_02033 CDS open 3144-4091 _na     315_aa pyrB aspartate carbamoyltransferase
4070 JRNM01000118.1 GCA000759165_02034 CDS open 4199-4654 _na     151_aa pyrI aspartate carbamoyltransferase regulatory subunit
4071 JRNM01000118.1 GCA000759165_02031 gene open 63-428
4072 JRNM01000118.1 GCA000759165_02032 gene open 650-2956
4073 JRNM01000118.1 GCA000759165_02033 gene open 3144-4091 pyrB
4074 JRNM01000118.1 GCA000759165_02034 gene open 4199-4654 pyrI
4075 JRNM01000119.1 GCA000759165_02035 CDS open 31-798 _na     255_aa hypothetical protein
4076 JRNM01000119.1 GCA000759165_02036 CDS open 991-1809 _na     272_aa GLPGLI family protein
4077 JRNM01000119.1 GCA000759165_02037 CDS open 1809-4403 _na     864_aa Outer membrane protein beta-barrel domain-containing protein
4078 JRNM01000119.1 GCA000759165_02038 CDS open 4406-4576 _na     56_aa Peptidase C39 domain-containing protein
4079 JRNM01000119.1 GCA000759165_02035 gene open 31-798
4080 JRNM01000119.1 GCA000759165_02036 gene open 991-1809
4081 JRNM01000119.1 GCA000759165_02037 gene open 1809-4403
4082 JRNM01000119.1 GCA000759165_02038 gene open 4406-4576
4083 JRNM01000120.1 GCA000759165_02039 CDS open 203-1105 _na     300_aa Ppx/GppA phosphatase family protein
4084 JRNM01000120.1 GCA000759165_02040 CDS open 1150-3213 _na     687_aa RNA degradosome polyphosphate kinase
4085 JRNM01000120.1 GCA000759165_02041 CDS open 3261-4151 _na     296_aa Leucine-rich repeat domain-containing protein
4086 JRNM01000120.1 GCA000759165_02039 gene open 203-1105
4087 JRNM01000120.1 GCA000759165_02040 gene open 1150-3213
4088 JRNM01000120.1 GCA000759165_02041 gene open 3261-4151
4089 JRNM01000121.1 GCA000759165_02042 CDS open 464-670 _na     68_aa Helix-turn-helix transcriptional regulator
4090 JRNM01000121.1 GCA000759165_02043 CDS open 697-2571 _na     624_aa DNA cytosine methyltransferase
4091 JRNM01000121.1 GCA000759165_02044 CDS open 2594-3763 _na     389_aa MvaI/BcnI restriction endonuclease family protein
4092 JRNM01000121.1 GCA000759165_02042 gene open 464-670
4093 JRNM01000121.1 GCA000759165_02043 gene open 697-2571
4094 JRNM01000121.1 GCA000759165_02044 gene open 2594-3763
4095 JRNM01000122.1 GCA000759165_02045 CDS open 330-1244 _na     304_aa Lipoprotein
4096 JRNM01000122.1 GCA000759165_02046 CDS open 1268-1969 _na     233_aa rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
4097 JRNM01000122.1 GCA000759165_02045 gene open 330-1244
4098 JRNM01000122.1 GCA000759165_02046 gene open 1268-1969 rsmI
4099 JRNM01000123.1 GCA000759165_02047 CDS open 233-370 _na     45_aa hypothetical protein
4100 JRNM01000123.1 GCA000759165_02048 CDS open 605-1120 _na     171_aa bacteriocin fulvocin C-related protein
4101 JRNM01000123.1 GCA000759165_02047 gene open 233-370
4102 JRNM01000123.1 GCA000759165_02048 gene open 605-1120
4103 JRNM01000124.1 GCA000759165_02049 CDS open 122-874 _na     250_aa xerD Tyrosine recombinase XerD
4104 JRNM01000124.1 GCA000759165_02050 CDS open 992-1435 _na     147_aa Integrase
4105 JRNM01000124.1 GCA000759165_02051 CDS open 1495-2724 _na     409_aa Tyr recombinase domain-containing protein
4106 JRNM01000124.1 GCA000759165_02049 gene open 122-874 xerD
4107 JRNM01000124.1 GCA000759165_02050 gene open 992-1435
4108 JRNM01000124.1 GCA000759165_02051 gene open 1495-2724
4109 JRNM01000125.1 GCA000759165_02052 CDS open 82-690 _na     202_aa Outer membrane protein beta-barrel domain-containing protein
4110 JRNM01000125.1 GCA000759165_02053 CDS open 745-3042 _na     765_aa priA primosomal protein N'
4111 JRNM01000125.1 GCA000759165_02052 gene open 82-690
4112 JRNM01000125.1 GCA000759165_02053 gene open 745-3042 priA
4113 JRNM01000127.1 GCA000759165_02054 CDS open 27-233 _na     68_aa hypothetical protein
4114 JRNM01000127.1 GCA000759165_02055 CDS open 297-2066 _na     589_aa Outer membrane protein beta-barrel domain-containing protein
4115 JRNM01000127.1 GCA000759165_02054 gene open 27-233
4116 JRNM01000127.1 GCA000759165_02055 gene open 297-2066
4117 JRNM01000128.1 GCA000759165_02056 CDS open 283-726 _na     147_aa ABC transporter permease
4118 JRNM01000128.1 GCA000759165_02056 gene open 283-726
4119 JRNM01000129.1 GCA000759165_02057 CDS open 139-582 _na     147_aa hypothetical protein
4120 JRNM01000129.1 GCA000759165_02058 CDS open 1092-1727 _na     211_aa Lipoprotein
4121 JRNM01000129.1 GCA000759165_02059 CDS open 1772-2071 _na     99_aa hypothetical protein
4122 JRNM01000129.1 GCA000759165_02057 gene open 139-582
4123 JRNM01000129.1 GCA000759165_02058 gene open 1092-1727
4124 JRNM01000129.1 GCA000759165_02059 gene open 1772-2071
4125 JRNM01000130.1 GCA000759165_02060 CDS open 308-1261 _na     317_aa RHS repeat-associated core domain-containing protein
4126 JRNM01000130.1 GCA000759165_02061 CDS open 1206-1940 _na     244_aa hypothetical protein
4127 JRNM01000130.1 GCA000759165_02062 CDS open 2167-2604 _na     145_aa Astacin (Peptidase family M12A)
4128 JRNM01000130.1 GCA000759165_02060 gene open 308-1261
4129 JRNM01000130.1 GCA000759165_02061 gene open 1206-1940
4130 JRNM01000130.1 GCA000759165_02062 gene open 2167-2604
4131 JRNM01000131.1 GCA000759165_02063 CDS open 557-2077 _na     506_aa hypothetical protein
4132 JRNM01000131.1 GCA000759165_02064 CDS open 2105-2593 _na     162_aa hypothetical protein
4133 JRNM01000131.1 GCA000759165_02063 gene open 557-2077
4134 JRNM01000131.1 GCA000759165_02064 gene open 2105-2593
4135 JRNM01000132.1 GCA000759165_02065 CDS open 56-2404 _na     782_aa Outer membrane protein beta-barrel domain-containing protein
4136 JRNM01000132.1 GCA000759165_02065 gene open 56-2404
4137 JRNM01000133.1 GCA000759165_02066 CDS open 475-657 _na     60_aa hypothetical protein
4138 JRNM01000133.1 GCA000759165_02067 CDS open 621-845 _na     74_aa hypothetical protein
4139 JRNM01000133.1 GCA000759165_02068 CDS open 848-1789 _na     313_aa hypothetical protein
4140 JRNM01000133.1 GCA000759165_02066 gene open 475-657
4141 JRNM01000133.1 GCA000759165_02067 gene open 621-845
4142 JRNM01000133.1 GCA000759165_02068 gene open 848-1789
4143 JRNM01000134.1 GCA000759165_02069 CDS open 122-1834 _na     570_aa Lipoprotein
4144 JRNM01000134.1 GCA000759165_02070 CDS open 1878-2072 _na     64_aa hypothetical protein
4145 JRNM01000134.1 GCA000759165_02069 gene open 122-1834
4146 JRNM01000134.1 GCA000759165_02070 gene open 1878-2072
4147 JRNM01000135.1 GCA000759165_02071 CDS open 376-720 _na     114_aa IS982 family transposase
4148 JRNM01000135.1 GCA000759165_02072 CDS open 863-2170 _na     435_aa Porin
4149 JRNM01000135.1 GCA000759165_02071 gene open 376-720
4150 JRNM01000135.1 GCA000759165_02072 gene open 863-2170
4151 JRNM01000137.1 GCA000759165_02073 CDS open 70-1077 _na     335_aa xerD Tyrosine recombinase XerD
4152 JRNM01000137.1 GCA000759165_02073 gene open 70-1077 xerD
4153 JRNM01000138.1 GCA000759165_02074 CDS open 151-1533 _na     460_aa mgtE magnesium transporter
4154 JRNM01000138.1 GCA000759165_02074 gene open 151-1533 mgtE
4155 JRNM01000139.1 GCA000759165_02075 CDS open 27-1601 _na     524_aa tnpC IS66 family transposase
4156 JRNM01000139.1 GCA000759165_02076 CDS open 1665-2009 _na     114_aa tnpB IS66 family insertion sequence element accessory protein TnpB
4157 JRNM01000139.1 GCA000759165_02075 gene open 27-1601 tnpC
4158 JRNM01000139.1 GCA000759165_02076 gene open 1665-2009 tnpB
4159 JRNM01000140.1 GCA000759165_02077 CDS open 11-1567 _na     518_aa IS1634 family transposase
4160 JRNM01000140.1 GCA000759165_02077 gene open 11-1567
4161 JRNM01000141.1 GCA000759165_02078 CDS open 101-298 _na     65_aa Natural product
4162 JRNM01000141.1 GCA000759165_02078 gene open 101-298
4163 JRNM01000142.1 GCA000759165_02079 CDS open 103-1509 _na     468_aa ltrA group II intron reverse transcriptase/maturase
4164 JRNM01000142.1 GCA000759165_02079 gene open 103-1509 ltrA
4165 JRNM01000144.1 GCA000759165_02080 CDS open 47-298 _na     83_aa molybdenum ABC transporter ATP-binding protein
4166 JRNM01000144.1 GCA000759165_02081 CDS open 321-740 _na     139_aa PcfK-like protein
4167 JRNM01000144.1 GCA000759165_02080 gene open 47-298
4168 JRNM01000144.1 GCA000759165_02081 gene open 321-740
4169 JRNM01000146.1 GCA000759165_02082 CDS open 71-298 _na     75_aa Molybdenum ABC transporter ATP-binding protein
4170 JRNM01000146.1 GCA000759165_02083 CDS open 321-740 _na     139_aa PcfK-like protein
4171 JRNM01000146.1 GCA000759165_02082 gene open 71-298
4172 JRNM01000146.1 GCA000759165_02083 gene open 321-740
4173 JRNM01000147.1 GCA000759165_02084 CDS open 130-1431 _na     433_aa IS1380 family transposase
4174 JRNM01000147.1 GCA000759165_02084 gene open 130-1431
4175 JRNM01000148.1 GCA000759165_02085 CDS open 26-853 _na     275_aa hypothetical protein
4176 JRNM01000148.1 GCA000759165_02086 CDS open 900-1373 _na     157_aa DUF1896 domain-containing protein
4177 JRNM01000148.1 GCA000759165_02085 gene open 26-853
4178 JRNM01000148.1 GCA000759165_02086 gene open 900-1373
4179 JRNM01000149.1 GCA000759165_02087 CDS open 61-447 _na     128_aa Transposase
4180 JRNM01000149.1 GCA000759165_02088 CDS open 963-1097 _na     44_aa hypothetical protein
4181 JRNM01000149.1 GCA000759165_02087 gene open 61-447
4182 JRNM01000149.1 GCA000759165_02088 gene open 963-1097
4183 JRNM01000150.1 GCA000759165_02089 CDS open 74-1276 _na     400_aa IS256 family transposase
4184 JRNM01000150.1 GCA000759165_02089 gene open 74-1276
4185 JRNM01000151.1 GCA000759165_02090 CDS open 460-960 _na     166_aa hypothetical protein
4186 JRNM01000151.1 GCA000759165_02091 CDS open 884-1228 _na     114_aa Transposase family protein
4187 JRNM01000151.1 GCA000759165_02090 gene open 460-960
4188 JRNM01000151.1 GCA000759165_02091 gene open 884-1228
4189 JRNM01000153.1 GCA000759165_02092 CDS open 99-413 _na     104_aa DNA-binding protein
4190 JRNM01000153.1 GCA000759165_02092 gene open 99-413
4191 JRNM01000154.1 GCA000759165_02093 CDS open 11-496 _na     161_aa hlyD HlyD family secretion protein
4192 JRNM01000154.1 GCA000759165_02093 gene open 11-496 hlyD
4193 JRNM01000156.1 GCA000759165_02094 CDS open 236-811 _na     191_aa TonB-dependent receptor plug domain-containing protein
4194 JRNM01000156.1 GCA000759165_02094 gene open 236-811
4195 JRNM01000157.1 GCA000759165_02095 CDS open 92-853 _na     253_aa hypothetical protein
4196 JRNM01000157.1 GCA000759165_02095 gene open 92-853
4197 JRNM01000158.1 GCA000759165_02096 CDS open 14-970 _na     318_aa tnp IS982 family transposase
4198 JRNM01000158.1 GCA000759165_02096 gene open 14-970 tnp
4199 JRNM01000159.1 GCA000759165_02097 CDS open 795-911 _na     38_aa hypothetical protein
4200 JRNM01000159.1 GCA000759165_02097 gene open 795-911
4201 JRNM01000160.1 GCA000759165_02098 CDS open 17-214 _na     65_aa hypothetical protein
4202 JRNM01000160.1 GCA000759165_02099 CDS open 211-930 _na     239_aa Lipoprotein
4203 JRNM01000160.1 GCA000759165_02098 gene open 17-214
4204 JRNM01000160.1 GCA000759165_02099 gene open 211-930
4205 JRNM01000161.1 GCA000759165_02101 CDS open 682-813 _na     43_aa hypothetical protein
4206 JRNM01000161.1 GCA000759165_02101 gene open 682-813
4207 JRNM01000161.1 GCA000759165_02100 gene open 469-553 trnS
4208 JRNM01000161.1 GCA000759165_02100 tRNA open 469-553 trnS tRNA-Ser(tga)
4209 JRNM01000162.1 GCA000759165_02102 CDS open 159-851 _na     230_aa HTH tetR-type domain-containing protein
4210 JRNM01000162.1 GCA000759165_02102 gene open 159-851
4211 JRNM01000163.1 GCA000759165_02103 CDS open 391-672 _na     93_aa hypothetical protein
4212 JRNM01000163.1 GCA000759165_02103 gene open 391-672
4213 JRNM01000164.1 GCA000759165_02104 CDS open 463-639 _na     58_aa hypothetical protein
4214 JRNM01000164.1 GCA000759165_02104 gene open 463-639
4215 JRNM01000166.1 GCA000759165_02105 CDS open 95-457 _na     120_aa hypothetical protein
4216 JRNM01000166.1 GCA000759165_02105 gene open 95-457
4217 JRNM01000168.1 GCA000759165_02106 CDS open 43-528 _na     161_aa ATP-binding cassette domain-containing protein
4218 JRNM01000168.1 GCA000759165_02106 gene open 43-528
4219 JRNM01000169.1 GCA000759165_02107 CDS open 67-381 _na     104_aa Helix-turn-helix domain-containing protein
4220 JRNM01000169.1 GCA000759165_02107 gene open 67-381
4221 JRNM01000171.1 GCA000759165_02108 CDS open 65-328 _na     87_aa hypothetical protein
4222 JRNM01000171.1 GCA000759165_02108 gene open 65-328
4223 JRNM01000172.1 GCA000759165_02109 CDS open 269-520 _na     83_aa CCDC85 family
4224 JRNM01000172.1 GCA000759165_02109 gene open 269-520