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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Staphylococcus caprae (GCA_000160215.1)

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PROKKA Annotations for GCA_000160215.1
Genome Selected: Staphylococcus caprae
ContigsBases CDSrRNA tmRNAtRNA
26 2,629,570 2502 4 1 49
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Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:6]    |    Number of Records Found: 2609 [6 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  6  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2501 GG696773.1 GCA_000160215.1_02501 CDS open 1303545-1304621 1077_na     358_aa pepA_2 Glutamyl aminopeptidase
2502 GG696773.1 GCA_000160215.1_02502 CDS open 1304707-1305021 315_na     104_aa hypothetical protein
2503 GG696773.1 GCA_000160215.1_02503 CDS open 1305097-1305918 822_na     273_aa ytnP putative quorum-quenching lactonase YtnP
2504 GG696773.1 GCA_000160215.1_02504 CDS open 1306544-1307188 645_na     214_aa trmB tRNA (guanine-N(7)-)-methyltransferase
2505 GG696773.1 GCA_000160215.1_02505 CDS open 1307201-1307995 795_na     264_aa hypothetical protein
2506 GG696773.1 GCA_000160215.1_02506 CDS open 1308393-1309241 849_na     282_aa dat D-alanine aminotransferase
2507 GG696773.1 GCA_000160215.1_02507 CDS open 1309245-1310654 1410_na     469_aa Putative dipeptidase
2508 GG696773.1 GCA_000160215.1_02508 CDS open 1310917-1311342 426_na     141_aa hypothetical protein
2509 GG696773.1 GCA_000160215.1_02509 CDS open 1311364-1312056 693_na     230_aa rsuA Ribosomal small subunit pseudouridine synthase A
2510 GG696773.1 GCA_000160215.1_02510 CDS open 1312053-1313714 1662_na     553_aa murJ Lipid II flippase MurJ
2511 GG696773.1 GCA_000160215.1_02511 CDS open 1314045-1315310 1266_na     421_aa baiN 3-dehydro-bile acid delta(4%2C6)-reductase
2512 GG696773.1 GCA_000160215.1_02512 CDS open 1315387-1326498 11112_na     3703_aa hypothetical protein
2513 GG696773.1 GCA_000160215.1_02513 CDS open 1327131-1327442 312_na     103_aa Sulfurtransferase
2514 GG696773.1 GCA_000160215.1_02514 CDS open 1327466-1328572 1107_na     368_aa leuS_1 Leucine--tRNA ligase
2515 GG696773.1 GCA_000160215.1_02515 CDS open 1328656-1329882 1227_na     408_aa leuS_2 Leucine--tRNA ligase
2516 GG696773.1 GCA_000160215.1_02516 CDS open 1330176-1331396 1221_na     406_aa mdrP_3 Na(+)%2C Li(+)%2C K(+)H(+) antiporter
2517 GG696773.1 GCA_000160215.1_02517 CDS open 1331503-1332462 960_na     319_aa hypothetical protein
2518 GG696773.1 GCA_000160215.1_02518 CDS open 1332459-1333022 564_na     187_aa hypothetical protein
2519 GG696773.1 GCA_000160215.1_02519 CDS open 1333096-1333497 402_na     133_aa rot HTH-type transcriptional regulator rot
2520 GG696773.1 GCA_000160215.1_02520 CDS open 1334199-1335026 828_na     275_aa ytpA Phospholipase YtpA
2521 GG696773.1 GCA_000160215.1_02521 CDS open 1335274-1336275 1002_na     333_aa putB Proline dehydrogenase 2
2522 GG696773.1 GCA_000160215.1_02522 CDS open 1336348-1336806 459_na     152_aa ribH 6%2C7-dimethyl-8-ribityllumazine synthase
2523 GG696773.1 GCA_000160215.1_02523 CDS open 1336850-1338031 1182_na     393_aa ribBA Riboflavin biosynthesis protein RibBA
2524 GG696773.1 GCA_000160215.1_02524 CDS open 1338043-1338675 633_na     210_aa ribE Riboflavin synthase
2525 GG696773.1 GCA_000160215.1_02525 CDS open 1338682-1339725 1044_na     347_aa ribD Riboflavin biosynthesis protein RibD
2526 GG696773.1 misc_RNA open 1339877-1340010 FMN
2527 GG696773.1 GCA_000160215.1_02527 CDS open 1340150-1341640 1491_na     496_aa hypothetical protein
2528 GG696773.1 GCA_000160215.1_02528 CDS open 1341958-1342809 852_na     283_aa hypothetical protein
2529 GG696773.1 GCA_000160215.1_02529 CDS open 1343124-1343342 219_na     72_aa hypothetical protein
2530 GG696773.1 GCA_000160215.1_02530 CDS open 1343551-1344027 477_na     158_aa sigS RNA polymerase sigma factor SigS
2531 GG696773.1 GCA_000160215.1_02531 CDS open 1344041-1344484 444_na     147_aa hypothetical protein
2532 GG696773.1 GCA_000160215.1_02532 CDS open 1344471-1344914 444_na     147_aa hypothetical protein
2533 GG696773.1 GCA_000160215.1_02533 CDS open 1345073-1345786 714_na     237_aa tal Transaldolase
2534 GG696773.1 GCA_000160215.1_02534 CDS open 1346118-1346387 270_na     89_aa hypothetical protein
2535 GG696773.1 GCA_000160215.1_02535 CDS open 1346485-1346850 366_na     121_aa crcB_1 Putative fluoride ion transporter CrcB
2536 GG696773.1 GCA_000160215.1_02536 CDS open 1346847-1347200 354_na     117_aa crcB_2 Putative fluoride ion transporter CrcB
2537 GG696773.1 GCA_000160215.1_02537 CDS open 1347477-1348313 837_na     278_aa yvgN Glyoxal reductase
2538 GG696773.1 GCA_000160215.1_02538 CDS open 1348469-1349377 909_na     302_aa hypothetical protein
2539 GG696773.1 GCA_000160215.1_02539 CDS open 1349484-1350680 1197_na     398_aa metK S-adenosylmethionine synthase
2540 GG696773.1 misc_RNA open 1350790-1350900 SAM
2541 GG696773.1 GCA_000160215.1_02541 CDS open 1351056-1352648 1593_na     530_aa pckA Phosphoenolpyruvate carboxykinase (ATP)
2542 GG696773.1 GCA_000160215.1_02542 CDS open 1352727-1353509 783_na     260_aa hypothetical protein
2543 GG696773.1 GCA_000160215.1_02543 CDS open 1353490-1353963 474_na     157_aa ytkD Putative 8-oxo-dGTP diphosphatase YtkD
2544 GG696773.1 GCA_000160215.1_02544 CDS open 1354032-1354283 252_na     83_aa Putative membrane protein insertion efficiency factor
2545 GG696773.1 GCA_000160215.1_02545 CDS open 1354280-1355281 1002_na     333_aa menC o-succinylbenzoate synthase
2546 GG696773.1 GCA_000160215.1_02546 CDS open 1355271-1356680 1410_na     469_aa menE 2-succinylbenzoate--CoA ligase
2547 GG696773.1 tRNA open 1357359-1357447 tRNA-Ser(gga)
2548 GG696773.1 tRNA open 1357506-1357579 tRNA-Glu(ttc)
2549 GG696773.1 tRNA open 1357580-1357654 tRNA-Asn(gtt)
2550 GG696773.1 tRNA open 1357666-1357739 tRNA-Gly(tcc)
2551 GG696773.1 tRNA open 1357757-1357832 tRNA-His(gtg)
2552 GG696773.1 tRNA open 1357845-1357919 tRNA-Phe(gaa)
2553 GG696773.1 tRNA open 1357929-1358004 tRNA-Asp(gtc)
2554 GG696773.1 tRNA open 1358020-1358093 tRNA-Met(cat)
2555 GG696773.1 misc_RNA open 1358074-1358167 S774
2556 GG696773.1 GCA_000160215.1_02556 CDS open 1358402-1358956 555_na     184_aa ydeN Putative hydrolase YdeN
2557 GG696773.1 GCA_000160215.1_02557 CDS open 1359101-1359427 327_na     108_aa hemY_1 Protoporphyrinogen oxidase
2558 GG696773.1 GCA_000160215.1_02558 CDS open 1359402-1360496 1095_na     364_aa hemY_2 Protoporphyrinogen oxidase
2559 GG696773.1 GCA_000160215.1_02559 CDS open 1360774-1361697 924_na     307_aa hemH Ferrochelatase
2560 GG696773.1 GCA_000160215.1_02560 CDS open 1361772-1362806 1035_na     344_aa hemE Uroporphyrinogen decarboxylase
2561 GG696773.1 GCA_000160215.1_02561 CDS open 1363146-1363649 504_na     167_aa traP Signal transduction protein TRAP
2562 GG696773.1 GCA_000160215.1_02562 CDS open 1364009-1365232 1224_na     407_aa hypothetical protein
2563 GG696773.1 GCA_000160215.1_02563 CDS open 1365225-1365965 741_na     246_aa ecsA ABC-type transporter ATP-binding protein EcsA
2564 GG696773.1 GCA_000160215.1_02564 CDS open 1366097-1366519 423_na     140_aa hit Protein hit
2565 GG696773.1 GCA_000160215.1_02565 CDS open 1366599-1366970 372_na     123_aa hypothetical protein
2566 GG696773.1 GCA_000160215.1_02566 CDS open 1367158-1367727 570_na     189_aa hypothetical protein
2567 GG696773.1 GCA_000160215.1_02567 CDS open 1367931-1368926 996_na     331_aa prsA Foldase protein PrsA
2568 GG696773.1 misc_RNA open 1369036-1369142 fstAT
2569 GG696773.1 GCA_000160215.1_02569 CDS open 1369392-1370333 942_na     313_aa yhaM 3-5 exoribonuclease YhaM
2570 GG696773.1 GCA_000160215.1_02570 CDS open 1370333-1373269 2937_na     978_aa hypothetical protein
2571 GG696773.1 GCA_000160215.1_02571 CDS open 1373259-1374455 1197_na     398_aa yhaO putative metallophosphoesterase YhaO
2572 GG696773.1 GCA_000160215.1_02572 CDS open 1374840-1375184 345_na     114_aa hypothetical protein
2573 GG696773.1 GCA_000160215.1_02573 CDS open 1375256-1376386 1131_na     376_aa hypothetical protein
2574 GG696773.1 GCA_000160215.1_02574 CDS open 1376615-1377079 465_na     154_aa hypothetical protein
2575 GG696773.1 GCA_000160215.1_02575 CDS open 1377332-1377955 624_na     207_aa vraR_2 Response regulator protein VraR
2576 GG696773.1 GCA_000160215.1_02576 CDS open 1377974-1379020 1047_na     348_aa hypothetical protein
2577 GG696773.1 GCA_000160215.1_02577 CDS open 1379265-1380092 828_na     275_aa rluD_3 Ribosomal large subunit pseudouridine synthase D
2578 GG696773.1 GCA_000160215.1_02578 CDS open 1380192-1381577 1386_na     461_aa fumC Fumarate hydratase class II
2579 GG696773.1 GCA_000160215.1_02579 CDS open 1381730-1382128 399_na     132_aa hypothetical protein
2580 GG696773.1 GCA_000160215.1_02580 CDS open 1382364-1382543 180_na     59_aa hypothetical protein
2581 GG696773.1 GCA_000160215.1_02581 CDS open 1382568-1383167 600_na     199_aa nagB_2 Glucosamine-6-phosphate deaminase
2582 GG696773.1 GCA_000160215.1_02582 CDS open 1383347-1383817 471_na     156_aa trmL tRNA (cytidine(34)-2-O)-methyltransferase
2583 GG696773.1 GCA_000160215.1_02583 CDS open 1383820-1384947 1128_na     375_aa queG Epoxyqueuosine reductase
2584 GG696773.1 GCA_000160215.1_02584 CDS open 1385107-1385829 723_na     240_aa tcyC_2 L-cystine import ATP-binding protein TcyC
2585 GG696773.1 GCA_000160215.1_02585 CDS open 1385822-1386949 1128_na     375_aa hypothetical protein
2586 GG696773.1 GCA_000160215.1_02586 CDS open 1386933-1387280 348_na     115_aa hypothetical protein
2587 GG696773.1 GCA_000160215.1_02587 CDS open 1387423-1388481 1059_na     352_aa hypothetical protein
2588 GG696773.1 GCA_000160215.1_02588 CDS open 1388827-1389147 321_na     106_aa hypothetical protein
2589 GG696773.1 GCA_000160215.1_02589 CDS open 1389359-1390096 738_na     245_aa hypothetical protein
2590 GG696773.1 tRNA open 1390760-1390843 tRNA-Leu(caa)
2591 GG696773.1 tRNA open 1390884-1390958 tRNA-Gly(tcc)
2592 GG696773.1 tRNA open 1390975-1391049 tRNA-Gly(tcc)
2593 GG696773.1 tRNA open 1391060-1391133 tRNA-Cys(gca)
2594 GG696773.1 tRNA open 1391139-1391210 tRNA-Gln(ttg)
2595 GG696773.1 tRNA open 1391221-1391294 tRNA-His(gtg)
2596 GG696773.1 tRNA open 1391297-1391370 tRNA-Trp(cca)
2597 GG696773.1 tRNA open 1391378-1391461 tRNA-Tyr(gta)
2598 GG696773.1 tRNA open 1391468-1391543 tRNA-Thr(tgt)
2599 GG696773.1 tRNA open 1391553-1391625 tRNA-Phe(gaa)
2600 GG696773.1 tRNA open 1391644-1391719 tRNA-Asp(gtc)
2601 GG696773.1 tRNA open 1391732-1391807 tRNA-Met(cat)
2602 GG696773.1 tRNA open 1391817-1391909 tRNA-Ser(tga)
2603 GG696773.1 tRNA open 1391947-1392022 tRNA-Asp(gtc)
2604 GG696773.1 tRNA open 1392031-1392122 tRNA-Ser(tga)
2605 GG696773.1 tRNA open 1392131-1392204 tRNA-Met(cat)
2606 GG696773.1 tRNA open 1392232-1392306 tRNA-Met(cat)
2607 GG696773.1 tRNA open 1392331-1392406 tRNA-Ala(tgc)
2608 GG696773.1 tRNA open 1392423-1392496 tRNA-Pro(tgg)
2609 GG696773.1 tRNA open 1392505-1392579 tRNA-Arg(acg)