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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Schaalia sp. HMT-172 (GCA_000283035.1)

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PROKKA Annotations for GCA_000283035.1
Genome Selected: Schaalia sp. HMT-172
ContigsBases CDSrRNA tmRNAtRNA
239 2390495 1989 6 1 48
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Annotation Table [page:5]    |    Number of Records Found: 2053 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 ALIY01000230.1 GCA_000283035.1_02001 CDS open 321-812 492_na     163_aa hypothetical protein
2002 ALIY01000230.1 GCA_000283035.1_02002 CDS open 945-1472 528_na     175_aa hypothetical protein
2003 ALIY01000230.1 GCA_000283035.1_02003 CDS open 1477-1938 462_na     153_aa trmL tRNA (cytidine(34)-2-O)-methyltransferase
2004 ALIY01000230.1 GCA_000283035.1_02004 CDS open 2018-2509 492_na     163_aa hypothetical protein
2005 ALIY01000230.1 GCA_000283035.1_02005 CDS open 2671-4095 1425_na     474_aa pdhD Dihydrolipoyl dehydrogenase
2006 ALIY01000231.1 GCA_000283035.1_02006 CDS open 235-501 267_na     88_aa yoeB Toxin YoeB
2007 ALIY01000231.1 GCA_000283035.1_02007 CDS open 504-767 264_na     87_aa yefM Antitoxin YefM
2008 ALIY01000231.1 GCA_000283035.1_02008 CDS open 1177-2448 1272_na     423_aa expZ Nucleotide-binding protein ExpZ
2009 ALIY01000231.1 GCA_000283035.1_02009 CDS open 3263-3388 126_na     41_aa hypothetical protein
2010 ALIY01000232.1 GCA_000283035.1_02010 CDS open 4-354 351_na     116_aa hypothetical protein
2011 ALIY01000232.1 GCA_000283035.1_02011 CDS open 403-918 516_na     171_aa hypothetical protein
2012 ALIY01000232.1 GCA_000283035.1_02012 CDS open 1133-1663 531_na     176_aa hypothetical protein
2013 ALIY01000232.1 GCA_000283035.1_02013 CDS open 1864-2361 498_na     165_aa hypothetical protein
2014 ALIY01000232.1 GCA_000283035.1_02014 CDS open 2537-3175 639_na     212_aa hypothetical protein
2015 ALIY01000232.1 GCA_000283035.1_02015 CDS open 3034-3381 348_na     115_aa hypothetical protein
2016 ALIY01000232.1 GCA_000283035.1_02016 CDS open 3462-4139 678_na     225_aa hypothetical protein
2017 ALIY01000233.1 GCA_000283035.1_02017 CDS open 1097-1729 633_na     210_aa hypothetical protein
2018 ALIY01000233.1 GCA_000283035.1_02018 CDS open 1872-2336 465_na     154_aa putative HTH-type transcriptional regulator
2019 ALIY01000233.1 GCA_000283035.1_02019 CDS open 2425-2754 330_na     109_aa hypothetical protein
2020 ALIY01000233.1 GCA_000283035.1_02020 CDS open 2835-4328 1494_na     497_aa glnA_2 Glutamine synthetase
2021 ALIY01000234.1 GCA_000283035.1_02021 CDS open 73-402 330_na     109_aa hypothetical protein
2022 ALIY01000234.1 GCA_000283035.1_02022 CDS open 507-1865 1359_na     452_aa hypothetical protein
2023 ALIY01000234.1 GCA_000283035.1_02023 CDS open 1878-2177 300_na     99_aa hypothetical protein
2024 ALIY01000234.1 GCA_000283035.1_02024 CDS open 2354-2809 456_na     151_aa hypothetical protein
2025 ALIY01000235.1 GCA_000283035.1_02025 CDS open 481-1110 630_na     209_aa hypothetical protein
2026 ALIY01000235.1 tRNA open 1141-1213 tRNA-Lys(ttt)
2027 ALIY01000235.1 GCA_000283035.1_02027 CDS open 1283-3406 2124_na     707_aa RBKS_3 Ribokinase
2028 ALIY01000235.1 GCA_000283035.1_02028 CDS open 3547-4791 1245_na     414_aa bcr Bicyclomycin resistance protein
2029 ALIY01000235.1 GCA_000283035.1_02029 CDS open 5021-5962 942_na     313_aa hypothetical protein
2030 ALIY01000235.1 GCA_000283035.1_02030 CDS open 5959-6363 405_na     134_aa msrB Peptide methionine sulfoxide reductase MsrB
2031 ALIY01000236.1 GCA_000283035.1_02031 CDS open 706-1479 774_na     257_aa hypothetical protein
2032 ALIY01000236.1 GCA_000283035.1_02032 CDS open 1442-2167 726_na     241_aa hypothetical protein
2033 ALIY01000236.1 GCA_000283035.1_02033 CDS open 2368-3021 654_na     217_aa hypothetical protein
2034 ALIY01000236.1 GCA_000283035.1_02034 CDS open 3173-3913 741_na     246_aa gatD Lipid II isoglutaminyl synthase (glutamine-hydrolyzing) subunit GatD
2035 ALIY01000236.1 GCA_000283035.1_02035 CDS open 3910-5181 1272_na     423_aa murT Lipid II isoglutaminyl synthase (glutamine-hydrolyzing) subunit MurT
2036 ALIY01000238.1 GCA_000283035.1_02036 CDS open 3-473 471_na     156_aa hypothetical protein
2037 ALIY01000238.1 GCA_000283035.1_02037 CDS open 517-999 483_na     160_aa hypothetical protein
2038 ALIY01000238.1 GCA_000283035.1_02038 CDS open 1123-2520 1398_na     465_aa hemL Glutamate-1-semialdehyde 2%2C1-aminomutase
2039 ALIY01000238.1 GCA_000283035.1_02039 CDS open 2556-3587 1032_na     343_aa hemB Delta-aminolevulinic acid dehydratase
2040 ALIY01000238.1 GCA_000283035.1_02040 CDS open 3584-3814 231_na     76_aa hypothetical protein
2041 ALIY01000239.1 GCA_000283035.1_02041 CDS open 29-433 405_na     134_aa IS256 family transposase ISMlu1
2042 ALIY01000239.1 GCA_000283035.1_02042 CDS open 772-1566 795_na     264_aa tipA HTH-type transcriptional activator TipA
2043 ALIY01000239.1 tRNA open 1675-1747 tRNA-Asn(gtt)
2044 ALIY01000239.1 GCA_000283035.1_02044 CDS open 3818-4177 360_na     119_aa hypothetical protein
2045 ALIY01000239.1 GCA_000283035.1_02045 CDS open 4364-5881 1518_na     505_aa rbsA_3 Ribose import ATP-binding protein RbsA
2046 ALIY01000239.1 GCA_000283035.1_02046 CDS open 5878-6882 1005_na     334_aa rbsC Ribose import permease protein RbsC
2047 ALIY01000239.1 GCA_000283035.1_02047 CDS open 6977-8050 1074_na     357_aa hypothetical protein
2048 ALIY01000239.1 GCA_000283035.1_02048 CDS open 8191-10002 1812_na     603_aa fucI L-fucose isomerase
2049 ALIY01000239.1 GCA_000283035.1_02049 CDS open 10169-11578 1410_na     469_aa rhaB Rhamnulokinase
2050 ALIY01000239.1 GCA_000283035.1_02050 CDS open 11553-12548 996_na     331_aa rbsR_2 Ribose operon repressor
2051 ALIY01000239.1 GCA_000283035.1_02051 CDS open 12562-12993 432_na     143_aa fucU L-fucose mutarotase
2052 ALIY01000239.1 GCA_000283035.1_02052 CDS open 13326-14075 750_na     249_aa srlR Glucitol operon repressor
2053 ALIY01000239.1 GCA_000283035.1_02053 CDS open 14082-14249 168_na     55_aa hypothetical protein