HOMD Banner
Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Porphyromonas gingivalis (GCA_001314265.1)

Select a Genome:
PROKKA Annotations for GCA_001314265.1
Genome Selected: Porphyromonas gingivalis
ContigsBases CDSrRNA tmRNAtRNA
1 2378872 1993 12 1 53
[Table]   [NA Fasta]   [AA Fasta]      [Browser]   [Text]   [Excel]  
Search & Sort all 2073 Records
Search These Records: Clear
Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:5]    |    Number of Records Found: 2073 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 CP012889.1 GCA_001314265.1_02001 CDS open 2287303-2288133 831_na     276_aa pyrF Orotidine 5-phosphate decarboxylase
2002 CP012889.1 GCA_001314265.1_02002 CDS open 2288150-2289235 1086_na     361_aa prfA Peptide chain release factor RF1
2003 CP012889.1 GCA_001314265.1_02003 CDS open 2289260-2290426 1167_na     388_aa purM Phosphoribosylformylglycinamidine cyclo-ligase
2004 CP012889.1 GCA_001314265.1_02004 CDS open 2290455-2291396 942_na     313_aa hypothetical protein
2005 CP012889.1 GCA_001314265.1_02005 CDS open 2291629-2292327 699_na     232_aa hypothetical protein
2006 CP012889.1 GCA_001314265.1_02006 CDS open 2292300-2293601 1302_na     433_aa hypothetical protein
2007 CP012889.1 GCA_001314265.1_02007 CDS open 2293917-2294048 132_na     43_aa hypothetical protein
2008 CP012889.1 GCA_001314265.1_02008 CDS open 2294110-2296095 1986_na     661_aa hypothetical protein
2009 CP012889.1 GCA_001314265.1_02009 CDS open 2296157-2297059 903_na     300_aa hypothetical protein
2010 CP012889.1 GCA_001314265.1_02010 CDS open 2297065-2297850 786_na     261_aa hypothetical protein
2011 CP012889.1 GCA_001314265.1_02011 CDS open 2297946-2299145 1200_na     399_aa sdaB L-serine dehydratase 2
2012 CP012889.1 GCA_001314265.1_02012 CDS open 2299145-2300590 1446_na     481_aa hypothetical protein
2013 CP012889.1 GCA_001314265.1_02013 CDS open 2300609-2302423 1815_na     604_aa deaD ATP-dependent RNA helicase DeaD
2014 CP012889.1 GCA_001314265.1_02014 CDS open 2302569-2303210 642_na     213_aa kdsD Arabinose 5-phosphate isomerase KdsD
2015 CP012889.1 GCA_001314265.1_02015 CDS open 2303389-2304606 1218_na     405_aa putative zinc protease
2016 CP012889.1 GCA_001314265.1_02016 CDS open 2305635-2306114 480_na     159_aa dps DNA protection during starvation protein
2017 CP012889.1 GCA_001314265.1_02017 CDS open 2306243-2307517 1275_na     424_aa hypothetical protein
2018 CP012889.1 GCA_001314265.1_02018 CDS open 2307519-2308700 1182_na     393_aa hypothetical protein
2019 CP012889.1 GCA_001314265.1_02019 CDS open 2308703-2309698 996_na     331_aa hypothetical protein
2020 CP012889.1 GCA_001314265.1_02020 CDS open 2309747-2311252 1506_na     501_aa hypothetical protein
2021 CP012889.1 GCA_001314265.1_02021 CDS open 2311647-2311766 120_na     39_aa hypothetical protein
2022 CP012889.1 GCA_001314265.1_02022 CDS open 2312168-2314843 2676_na     891_aa mutS DNA mismatch repair protein MutS
2023 CP012889.1 GCA_001314265.1_02023 CDS open 2315136-2315864 729_na     242_aa putative transcriptional regulatory protein
2024 CP012889.1 GCA_001314265.1_02024 CDS open 2315907-2318366 2460_na     819_aa pheT Phenylalanine--tRNA ligase beta subunit
2025 CP012889.1 GCA_001314265.1_02025 CDS open 2318411-2318668 258_na     85_aa hypothetical protein
2026 CP012889.1 GCA_001314265.1_02026 CDS open 2318895-2319251 357_na     118_aa hypothetical protein
2027 CP012889.1 rRNA open 2319543-2321070 16S ribosomal RNA
2028 CP012889.1 tRNA open 2321576-2321650 tRNA-Ile(gat)
2029 CP012889.1 tRNA open 2321651-2321725 tRNA-Ala(tgc)
2030 CP012889.1 rRNA open 2321838-2324727 23S ribosomal RNA
2031 CP012889.1 rRNA open 2324827-2324932 5S ribosomal RNA
2032 CP012889.1 GCA_001314265.1_02032 CDS open 2325138-2328362 3225_na     1074_aa recB RecBCD enzyme subunit RecB
2033 CP012889.1 GCA_001314265.1_02033 CDS open 2328359-2329219 861_na     286_aa hypothetical protein
2034 CP012889.1 GCA_001314265.1_02034 CDS open 2329264-2330190 927_na     308_aa hypothetical protein
2035 CP012889.1 GCA_001314265.1_02035 CDS open 2330202-2330933 732_na     243_aa fabG_2 3-oxoacyl-[acyl-carrier-protein] reductase FabG
2036 CP012889.1 GCA_001314265.1_02036 CDS open 2330939-2331397 459_na     152_aa tagD Glycerol-3-phosphate cytidylyltransferase
2037 CP012889.1 GCA_001314265.1_02037 CDS open 2331419-2332516 1098_na     365_aa pdxA2 D-erythronate 4-phosphate dehydrogenase
2038 CP012889.1 GCA_001314265.1_02038 CDS open 2332560-2333615 1056_na     351_aa hypothetical protein
2039 CP012889.1 GCA_001314265.1_02039 CDS open 2333706-2334719 1014_na     337_aa rlmN Dual-specificity RNA methyltransferase RlmN
2040 CP012889.1 GCA_001314265.1_02040 CDS open 2334777-2335181 405_na     134_aa hypothetical protein
2041 CP012889.1 GCA_001314265.1_02041 CDS open 2335396-2336760 1365_na     454_aa hisS Histidine--tRNA ligase
2042 CP012889.1 GCA_001314265.1_02042 CDS open 2336821-2337309 489_na     162_aa dfrA Dihydrofolate reductase
2043 CP012889.1 GCA_001314265.1_02043 CDS open 2337355-2338149 795_na     264_aa thyA Thymidylate synthase
2044 CP012889.1 GCA_001314265.1_02044 CDS open 2338382-2339179 798_na     265_aa loiP Metalloprotease LoiP
2045 CP012889.1 GCA_001314265.1_02045 CDS open 2339389-2340270 882_na     293_aa hypothetical protein
2046 CP012889.1 GCA_001314265.1_02046 CDS open 2340512-2342449 1938_na     645_aa yheS putative ABC transporter ATP-binding protein YheS
2047 CP012889.1 GCA_001314265.1_02047 CDS open 2342446-2344533 2088_na     695_aa cpoB_3 Cell division coordinator CpoB
2048 CP012889.1 GCA_001314265.1_02048 CDS open 2344569-2345246 678_na     225_aa def Peptide deformylase
2049 CP012889.1 GCA_001314265.1_02049 CDS open 2345243-2345881 639_na     212_aa yqgF Putative pre-16S rRNA nuclease
2050 CP012889.1 GCA_001314265.1_02050 CDS open 2346161-2351884 5724_na     1907_aa hypothetical protein
2051 CP012889.1 GCA_001314265.1_02051 CDS open 2351898-2352842 945_na     314_aa panE 2-dehydropantoate 2-reductase
2052 CP012889.1 GCA_001314265.1_02052 CDS open 2352977-2354593 1617_na     538_aa ybiT putative ABC transporter ATP-binding protein YbiT
2053 CP012889.1 GCA_001314265.1_02053 CDS open 2354867-2355886 1020_na     339_aa hypothetical protein
2054 CP012889.1 GCA_001314265.1_02054 CDS open 2356136-2356390 255_na     84_aa hypothetical protein
2055 CP012889.1 GCA_001314265.1_02055 CDS open 2356414-2359275 2862_na     953_aa uvrA_2 UvrABC system protein A
2056 CP012889.1 tRNA open 2359399-2359483 tRNA-Leu(gag)
2057 CP012889.1 tRNA open 2359516-2359600 tRNA-Leu(cag)
2058 CP012889.1 tRNA open 2359688-2359763 tRNA-Gly(gcc)
2059 CP012889.1 GCA_001314265.1_02059 CDS open 2360314-2360496 183_na     60_aa hypothetical protein
2060 CP012889.1 GCA_001314265.1_02060 CDS open 2360688-2362040 1353_na     450_aa hypothetical protein
2061 CP012889.1 GCA_001314265.1_02061 CDS open 2362075-2363160 1086_na     361_aa rfbM Mannose-1-phosphate guanylyltransferase RfbM
2062 CP012889.1 GCA_001314265.1_02062 CDS open 2363451-2364965 1515_na     504_aa hypothetical protein
2063 CP012889.1 GCA_001314265.1_02063 CDS open 2365141-2367042 1902_na     633_aa dxs 1-deoxy-D-xylulose-5-phosphate synthase
2064 CP012889.1 GCA_001314265.1_02064 CDS open 2367096-2368436 1341_na     446_aa trkA Trk system potassium uptake protein TrkA
2065 CP012889.1 GCA_001314265.1_02065 CDS open 2368463-2369926 1464_na     487_aa trkH Trk system potassium uptake protein TrkH
2066 CP012889.1 tRNA open 2370117-2370188 tRNA-Cys(gca)
2067 CP012889.1 GCA_001314265.1_02067 CDS open 2370905-2372296 1392_na     463_aa mtaB Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB
2068 CP012889.1 GCA_001314265.1_02068 CDS open 2372293-2373210 918_na     305_aa lpxP Lipid A biosynthesis palmitoleoyltransferase
2069 CP012889.1 GCA_001314265.1_02069 CDS open 2373207-2374217 1011_na     336_aa hypothetical protein
2070 CP012889.1 GCA_001314265.1_02070 CDS open 2374359-2374955 597_na     198_aa hypothetical protein
2071 CP012889.1 GCA_001314265.1_02071 CDS open 2374948-2375244 297_na     98_aa hypothetical protein
2072 CP012889.1 GCA_001314265.1_02072 CDS open 2375324-2377546 2223_na     740_aa hypothetical protein
2073 CP012889.1 GCA_001314265.1_02073 CDS open 2377543-2378199 657_na     218_aa hypothetical protein