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Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Nanogingivalis sp. HMT-401 (GCA_013333405.2)

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PROKKA Annotations for GCA_013333405.2
Genome Selected: Nanogingivalis sp. HMT-401
ContigsBases CDSrRNA tmRNAtRNA
74 607771 608 0 0 30
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Annotation Table [page:2]    |    Number of Records Found: 640 [2 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
501 JABCOZ020000053.1 GCA_013333405.2_00501 CDS open 3565-4992 1428_na     475_aa hypothetical protein
502 JABCOZ020000053.1 GCA_013333405.2_00502 CDS open 4970-6511 1542_na     513_aa hypothetical protein
503 JABCOZ020000053.1 GCA_013333405.2_00503 CDS open 6554-8719 2166_na     721_aa hypothetical protein
504 JABCOZ020000053.1 GCA_013333405.2_00504 CDS open 8728-9843 1116_na     371_aa hypothetical protein
505 JABCOZ020000053.1 GCA_013333405.2_00505 CDS open 9909-11072 1164_na     387_aa btuD Vitamin B12 import ATP-binding protein BtuD
506 JABCOZ020000053.1 GCA_013333405.2_00506 CDS open 11072-11923 852_na     283_aa hypothetical protein
507 JABCOZ020000054.1 GCA_013333405.2_00507 CDS open 22-552 531_na     176_aa hypothetical protein
508 JABCOZ020000054.1 GCA_013333405.2_00508 CDS open 618-2594 1977_na     658_aa uvrB UvrABC system protein B
509 JABCOZ020000054.1 GCA_013333405.2_00509 CDS open 2852-3061 210_na     69_aa hypothetical protein
510 JABCOZ020000054.1 GCA_013333405.2_00510 CDS open 3077-3250 174_na     57_aa hypothetical protein
511 JABCOZ020000054.1 GCA_013333405.2_00511 CDS open 3582-3704 123_na     40_aa hypothetical protein
512 JABCOZ020000054.1 GCA_013333405.2_00512 CDS open 3847-4140 294_na     97_aa gatC Glutamyl-tRNA(Gln) amidotransferase subunit C
513 JABCOZ020000054.1 GCA_013333405.2_00513 CDS open 4148-5548 1401_na     466_aa gatA Glutamyl-tRNA(Gln) amidotransferase subunit A
514 JABCOZ020000054.1 GCA_013333405.2_00514 CDS open 5548-5961 414_na     137_aa hypothetical protein
515 JABCOZ020000054.1 GCA_013333405.2_00515 CDS open 5961-7478 1518_na     505_aa gatB Aspartylglutamyl-tRNA(AsnGln) amidotransferase subunit B
516 JABCOZ020000054.1 GCA_013333405.2_00516 CDS open 7480-7854 375_na     124_aa hypothetical protein
517 JABCOZ020000054.1 GCA_013333405.2_00517 CDS open 7956-8213 258_na     85_aa hypothetical protein
518 JABCOZ020000054.1 GCA_013333405.2_00518 CDS open 8213-8551 339_na     112_aa hypothetical protein
519 JABCOZ020000054.1 GCA_013333405.2_00519 CDS open 8595-9803 1209_na     402_aa tyrS Tyrosine--tRNA ligase
520 JABCOZ020000055.1 GCA_013333405.2_00520 CDS open 380-748 369_na     122_aa hpf Ribosome hibernation promotion factor
521 JABCOZ020000055.1 GCA_013333405.2_00521 CDS open 834-1064 231_na     76_aa nrdH Glutaredoxin-like protein NrdH
522 JABCOZ020000055.1 GCA_013333405.2_00522 CDS open 1182-2444 1263_na     420_aa serS Serine--tRNA ligase
523 JABCOZ020000055.1 GCA_013333405.2_00523 CDS open 2578-3243 666_na     221_aa hypothetical protein
524 JABCOZ020000055.1 GCA_013333405.2_00524 CDS open 3362-3748 387_na     128_aa hypothetical protein
525 JABCOZ020000055.1 GCA_013333405.2_00525 CDS open 3857-4183 327_na     108_aa hypothetical protein
526 JABCOZ020000055.1 GCA_013333405.2_00526 CDS open 4244-4840 597_na     198_aa tsf Elongation factor Ts
527 JABCOZ020000055.1 GCA_013333405.2_00527 CDS open 4864-5529 666_na     221_aa rpsB 30S ribosomal protein S2
528 JABCOZ020000056.1 GCA_013333405.2_00528 CDS open 143-928 786_na     261_aa galE UDP-glucose 4-epimerase
529 JABCOZ020000056.1 GCA_013333405.2_00529 CDS open 1020-1361 342_na     113_aa hypothetical protein
530 JABCOZ020000056.1 GCA_013333405.2_00530 CDS open 1371-2957 1587_na     528_aa hypothetical protein
531 JABCOZ020000056.1 GCA_013333405.2_00531 CDS open 2972-3658 687_na     228_aa yxdL ABC transporter ATP-binding protein YxdL
532 JABCOZ020000056.1 GCA_013333405.2_00532 CDS open 3651-4955 1305_na     434_aa hypothetical protein
533 JABCOZ020000056.1 tRNA open 5061-5135 tRNA-Asn(gtt)
534 JABCOZ020000056.1 GCA_013333405.2_00534 CDS open 5227-6552 1326_na     441_aa rclA putative pyridine nucleotide-disulfide oxidoreductase RclA
535 JABCOZ020000056.1 GCA_013333405.2_00535 CDS open 6618-8516 1899_na     632_aa fda Fructose-bisphosphate aldolase class 1
536 JABCOZ020000056.1 GCA_013333405.2_00536 CDS open 8568-9434 867_na     288_aa hypothetical protein
537 JABCOZ020000056.1 GCA_013333405.2_00537 CDS open 9912-11471 1560_na     519_aa uvrC UvrABC system protein C
538 JABCOZ020000056.1 GCA_013333405.2_00538 CDS open 11508-12191 684_na     227_aa hypothetical protein
539 JABCOZ020000056.1 GCA_013333405.2_00539 CDS open 12261-12467 207_na     68_aa hypothetical protein
540 JABCOZ020000056.1 tRNA open 12553-12628 tRNA-Met(cat)
541 JABCOZ020000056.1 GCA_013333405.2_00541 CDS open 12669-13109 441_na     146_aa hypothetical protein
542 JABCOZ020000056.1 tRNA open 13168-13245 tRNA-Met(cat)
543 JABCOZ020000056.1 tRNA open 13440-13516 tRNA-Met(cat)
544 JABCOZ020000057.1 GCA_013333405.2_00544 CDS open 1113-1364 252_na     83_aa hypothetical protein
545 JABCOZ020000057.1 GCA_013333405.2_00545 CDS open 2912-3289 378_na     125_aa hypothetical protein
546 JABCOZ020000058.1 GCA_013333405.2_00546 CDS open 239-853 615_na     204_aa hypothetical protein
547 JABCOZ020000058.1 GCA_013333405.2_00547 CDS open 1123-1989 867_na     288_aa hypothetical protein
548 JABCOZ020000058.1 GCA_013333405.2_00548 CDS open 2121-2441 321_na     106_aa hypothetical protein
549 JABCOZ020000058.1 GCA_013333405.2_00549 CDS open 2547-3209 663_na     220_aa ung Uracil-DNA glycosylase
550 JABCOZ020000059.1 GCA_013333405.2_00550 CDS open 452-1585 1134_na     377_aa queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase
551 JABCOZ020000059.1 GCA_013333405.2_00551 CDS open 1620-2312 693_na     230_aa gpmA_2 2%2C3-bisphosphoglycerate-dependent phosphoglycerate mutase
552 JABCOZ020000060.1 GCA_013333405.2_00552 CDS open 388-2874 2487_na     828_aa clpC ATP-dependent Clp protease ATP-binding subunit ClpC
553 JABCOZ020000060.1 GCA_013333405.2_00553 CDS open 2979-3485 507_na     168_aa ogt Methylated-DNA--protein-cysteine methyltransferase
554 JABCOZ020000060.1 GCA_013333405.2_00554 CDS open 3513-4463 951_na     316_aa gtaB UTP--glucose-1-phosphate uridylyltransferase
555 JABCOZ020000060.1 GCA_013333405.2_00555 CDS open 4564-5760 1197_na     398_aa nusA Transcription terminationantitermination protein NusA
556 JABCOZ020000060.1 GCA_013333405.2_00556 CDS open 5853-7904 2052_na     683_aa recG ATP-dependent DNA helicase RecG
557 JABCOZ020000060.1 GCA_013333405.2_00557 CDS open 7987-10065 2079_na     692_aa rnj1 Ribonuclease J 1
558 JABCOZ020000060.1 GCA_013333405.2_00558 CDS open 10288-10932 645_na     214_aa hypothetical protein
559 JABCOZ020000061.1 GCA_013333405.2_00559 CDS open 528-806 279_na     92_aa hypothetical protein
560 JABCOZ020000061.1 GCA_013333405.2_00560 CDS open 879-1217 339_na     112_aa hypothetical protein
561 JABCOZ020000061.1 GCA_013333405.2_00561 CDS open 1369-1725 357_na     118_aa hypothetical protein
562 JABCOZ020000061.1 GCA_013333405.2_00562 CDS open 1742-2659 918_na     305_aa rimK Ribosomal protein S6--L-glutamate ligase
563 JABCOZ020000061.1 GCA_013333405.2_00563 CDS open 2659-4005 1347_na     448_aa hypothetical protein
564 JABCOZ020000061.1 GCA_013333405.2_00564 CDS open 4015-4725 711_na     236_aa rnc Ribonuclease 3
565 JABCOZ020000061.1 GCA_013333405.2_00565 CDS open 4725-5222 498_na     165_aa hypothetical protein
566 JABCOZ020000061.1 GCA_013333405.2_00566 CDS open 5203-5658 456_na     151_aa nusB Transcription antitermination protein NusB
567 JABCOZ020000061.1 GCA_013333405.2_00567 CDS open 5731-5910 180_na     59_aa hypothetical protein
568 JABCOZ020000061.1 GCA_013333405.2_00568 CDS open 6038-6592 555_na     184_aa hypothetical protein
569 JABCOZ020000061.1 GCA_013333405.2_00569 CDS open 6619-6822 204_na     67_aa leuS Leucine--tRNA ligase
570 JABCOZ020000062.1 GCA_013333405.2_00570 CDS open 836-1933 1098_na     365_aa hypothetical protein
571 JABCOZ020000062.1 GCA_013333405.2_00571 CDS open 1970-4501 2532_na     843_aa pepN Aminopeptidase N
572 JABCOZ020000062.1 GCA_013333405.2_00572 CDS open 4491-6251 1761_na     586_aa pgcA Phosphoglucomutase
573 JABCOZ020000062.1 GCA_013333405.2_00573 CDS open 6345-6629 285_na     94_aa hypothetical protein
574 JABCOZ020000063.1 GCA_013333405.2_00574 CDS open 72-686 615_na     204_aa hypothetical protein
575 JABCOZ020000063.1 GCA_013333405.2_00575 CDS open 731-1168 438_na     145_aa yqeY putative protein YqeY
576 JABCOZ020000063.1 GCA_013333405.2_00576 CDS open 1202-1531 330_na     109_aa hypothetical protein
577 JABCOZ020000063.1 GCA_013333405.2_00577 CDS open 1571-1789 219_na     72_aa hypothetical protein
578 JABCOZ020000063.1 GCA_013333405.2_00578 CDS open 1883-2917 1035_na     344_aa cpoA Alpha-galactosylglucosyldiacylglycerol synthase
579 JABCOZ020000063.1 GCA_013333405.2_00579 CDS open 2925-4562 1638_na     545_aa recJ Single-stranded-DNA-specific exonuclease RecJ
580 JABCOZ020000063.1 GCA_013333405.2_00580 CDS open 4572-4892 321_na     106_aa hypothetical protein
581 JABCOZ020000063.1 GCA_013333405.2_00581 CDS open 4992-6956 1965_na     654_aa priA primosomal protein N
582 JABCOZ020000063.1 GCA_013333405.2_00582 CDS open 6953-7303 351_na     116_aa hypothetical protein
583 JABCOZ020000064.1 GCA_013333405.2_00583 CDS open 533-805 273_na     90_aa hypothetical protein
584 JABCOZ020000064.1 GCA_013333405.2_00584 CDS open 863-2164 1302_na     433_aa obg GTPase Obg
585 JABCOZ020000065.1 GCA_013333405.2_00585 CDS open 38-424 387_na     128_aa rpsM 30S ribosomal protein S13
586 JABCOZ020000065.1 GCA_013333405.2_00586 CDS open 445-831 387_na     128_aa rpsK 30S ribosomal protein S11
587 JABCOZ020000065.1 GCA_013333405.2_00587 CDS open 835-1452 618_na     205_aa rpsD 30S ribosomal protein S4
588 JABCOZ020000065.1 GCA_013333405.2_00588 CDS open 1476-2399 924_na     307_aa rpoA DNA-directed RNA polymerase subunit alpha
589 JABCOZ020000065.1 GCA_013333405.2_00589 CDS open 2401-2784 384_na     127_aa rplQ 50S ribosomal protein L17
590 JABCOZ020000066.1 GCA_013333405.2_00590 CDS open 29-862 834_na     277_aa prmC Release factor glutamine methyltransferase
591 JABCOZ020000066.1 GCA_013333405.2_00591 CDS open 891-2078 1188_na     395_aa htrA Putative serine protease HtrA
592 JABCOZ020000066.1 GCA_013333405.2_00592 CDS open 2100-2924 825_na     274_aa hypothetical protein
593 JABCOZ020000066.1 GCA_013333405.2_00593 CDS open 2962-3579 618_na     205_aa sipT Signal peptidase I T
594 JABCOZ020000066.1 GCA_013333405.2_00594 CDS open 3614-4501 888_na     295_aa parB putative chromosome-partitioning protein ParB
595 JABCOZ020000066.1 GCA_013333405.2_00595 CDS open 4501-5271 771_na     256_aa soj Sporulation initiation inhibitor protein Soj
596 JABCOZ020000066.1 GCA_013333405.2_00596 CDS open 5351-5827 477_na     158_aa hypothetical protein
597 JABCOZ020000067.1 GCA_013333405.2_00597 CDS open 331-2661 2331_na     776_aa ctpE Calcium-transporting ATPase CtpE
598 JABCOZ020000067.1 GCA_013333405.2_00598 CDS open 2788-7665 4878_na     1625_aa hypothetical protein
599 JABCOZ020000067.1 GCA_013333405.2_00599 CDS open 7805-8473 669_na     222_aa hypothetical protein
600 JABCOZ020000067.1 GCA_013333405.2_00600 CDS open 8515-9306 792_na     263_aa hypothetical protein
601 JABCOZ020000067.1 GCA_013333405.2_00601 CDS open 9309-10490 1182_na     393_aa hypothetical protein
602 JABCOZ020000067.1 GCA_013333405.2_00602 CDS open 10477-11517 1041_na     346_aa trpS2 Tryptophan--tRNA ligase 2
603 JABCOZ020000067.1 GCA_013333405.2_00603 CDS open 11510-12325 816_na     271_aa menH 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase
604 JABCOZ020000068.1 GCA_013333405.2_00604 CDS open 39-1298 1260_na     419_aa cas9 CRISPR-associated endonuclease Cas9
605 JABCOZ020000068.1 GCA_013333405.2_00605 CDS open 1298-2182 885_na     294_aa cas1 CRISPR-associated endonuclease Cas1
606 JABCOZ020000068.1 GCA_013333405.2_00606 CDS open 2208-2531 324_na     107_aa cas2 CRISPR-associated endoribonuclease Cas2
607 JABCOZ020000069.1 GCA_013333405.2_00607 CDS open 153-695 543_na     180_aa infC Translation initiation factor IF-3
608 JABCOZ020000069.1 GCA_013333405.2_00608 CDS open 748-2253 1506_na     501_aa comM Competence protein ComM
609 JABCOZ020000069.1 GCA_013333405.2_00609 CDS open 3470-3814 345_na     114_aa hypothetical protein
610 JABCOZ020000069.1 GCA_013333405.2_00610 CDS open 3882-4292 411_na     136_aa hypothetical protein
611 JABCOZ020000070.1 GCA_013333405.2_00611 CDS open 78-737 660_na     219_aa hypothetical protein
612 JABCOZ020000070.1 GCA_013333405.2_00612 CDS open 859-1257 399_na     132_aa hypothetical protein
613 JABCOZ020000070.1 GCA_013333405.2_00613 CDS open 1336-2346 1011_na     336_aa hypothetical protein
614 JABCOZ020000070.1 GCA_013333405.2_00614 CDS open 2585-2917 333_na     110_aa hypothetical protein
615 JABCOZ020000070.1 GCA_013333405.2_00615 CDS open 2880-4418 1539_na     512_aa hypothetical protein
616 JABCOZ020000070.1 GCA_013333405.2_00616 CDS open 4839-5006 168_na     55_aa hypothetical protein
617 JABCOZ020000070.1 GCA_013333405.2_00617 CDS open 5006-5695 690_na     229_aa hypothetical protein
618 JABCOZ020000071.1 GCA_013333405.2_00618 CDS open 3-281 279_na     92_aa hypothetical protein
619 JABCOZ020000071.1 GCA_013333405.2_00619 CDS open 432-1013 582_na     193_aa def Peptide deformylase
620 JABCOZ020000071.1 GCA_013333405.2_00620 CDS open 1016-1903 888_na     295_aa fmt Methionyl-tRNA formyltransferase
621 JABCOZ020000071.1 GCA_013333405.2_00621 CDS open 1933-2346 414_na     137_aa hypothetical protein
622 JABCOZ020000071.1 GCA_013333405.2_00622 CDS open 2447-3343 897_na     298_aa infB Translation initiation factor IF-2
623 JABCOZ020000072.1 GCA_013333405.2_00623 CDS open 388-666 279_na     92_aa hypothetical protein
624 JABCOZ020000072.1 GCA_013333405.2_00624 CDS open 716-2176 1461_na     486_aa der GTPase Der
625 JABCOZ020000072.1 GCA_013333405.2_00625 CDS open 2217-2777 561_na     186_aa pth Peptidyl-tRNA hydrolase
626 JABCOZ020000072.1 GCA_013333405.2_00626 CDS open 2810-3289 480_na     159_aa smpB SsrA-binding protein
627 JABCOZ020000072.1 GCA_013333405.2_00627 CDS open 3290-4174 885_na     294_aa exoA Exodeoxyribonuclease
628 JABCOZ020000072.1 GCA_013333405.2_00628 CDS open 4167-4973 807_na     268_aa hypothetical protein
629 JABCOZ020000072.1 GCA_013333405.2_00629 CDS open 5020-6180 1161_na     386_aa yerB Putative lipoprotein YerB
630 JABCOZ020000072.1 GCA_013333405.2_00630 CDS open 6951-7649 699_na     232_aa hypothetical protein
631 JABCOZ020000072.1 GCA_013333405.2_00631 CDS open 7860-8285 426_na     141_aa murG UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
632 JABCOZ020000073.1 GCA_013333405.2_00632 CDS open 187-735 549_na     182_aa hypothetical protein
633 JABCOZ020000073.1 GCA_013333405.2_00633 CDS open 893-1873 981_na     326_aa rnhB Ribonuclease HII
634 JABCOZ020000073.1 GCA_013333405.2_00634 CDS open 1870-2277 408_na     135_aa hypothetical protein
635 JABCOZ020000074.1 GCA_013333405.2_00635 CDS open 1509-1736 228_na     75_aa hypothetical protein
636 JABCOZ020000074.1 GCA_013333405.2_00636 CDS open 1736-2095 360_na     119_aa hypothetical protein
637 JABCOZ020000074.1 tRNA open 2171-2247 tRNA-Lys(ttt)
638 JABCOZ020000074.1 GCA_013333405.2_00638 CDS open 2293-2757 465_na     154_aa hypothetical protein
639 JABCOZ020000074.1 GCA_013333405.2_00639 CDS open 2874-3974 1101_na     366_aa dnaJ Chaperone protein DnaJ
640 JABCOZ020000074.1 GCA_013333405.2_00640 CDS open 4016-4336 321_na     106_aa hypothetical protein