HOMD Banner
Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

PROKKAGenome Explorer: Schaalia sp. HMT-180 (GCA_024584435.1)

Select a Genome:
PROKKA Annotations for GCA_024584435.1
Genome Selected: Schaalia sp. HMT-180
ContigsBases CDSrRNA tmRNAtRNA
1 2389595 2057 9 1 48
[Table]   [NA Fasta]   [AA Fasta]      [Browser]   [Text]   [Excel]  
Search & Sort all 2125 Records
Search These Records: Clear
Sort Column:   Molecule   PID   NA   AA   Gene  Gene Product  Reverse
Annotation Table [page:5]    |    Number of Records Found: 2125 [5 Pages]    |    Previous Page <==> Next Page    |    Jump to Page: [ 1  2  3  4  5  ]
Notes:   1- Column headers only sort the current page. 2- Select [NA] or [AA] links to show sequences.
Region Protein-ID Type Genome
Viewer		 Range
(bp)		 Show Sequences
(length) NA / AA		 PROKKA
Gene		 PROKKA
GeneProduct
2001 CP102197.1 GCA_024584435.1_02001 CDS open 2241371-2241910 540_na     179_aa hpt Hypoxanthine-guanine phosphoribosyltransferase
2002 CP102197.1 GCA_024584435.1_02002 CDS open 2241933-2243984 2052_na     683_aa ftsH_2 ATP-dependent zinc metalloprotease FtsH
2003 CP102197.1 GCA_024584435.1_02003 CDS open 2243981-2244550 570_na     189_aa folE GTP cyclohydrolase 1
2004 CP102197.1 GCA_024584435.1_02004 CDS open 2244552-2245421 870_na     289_aa folP1 Dihydropteroate synthase
2005 CP102197.1 GCA_024584435.1_02005 CDS open 2245414-2247630 2217_na     738_aa hypothetical protein
2006 CP102197.1 GCA_024584435.1_02006 CDS open 2247643-2248119 477_na     158_aa hypothetical protein
2007 CP102197.1 GCA_024584435.1_02007 CDS open 2248145-2249128 984_na     327_aa hypothetical protein
2008 CP102197.1 GCA_024584435.1_02008 CDS open 2249089-2250282 1194_na     397_aa disA DNA integrity scanning protein DisA
2009 CP102197.1 GCA_024584435.1_02009 CDS open 2250319-2251971 1653_na     550_aa radA DNA repair protein RadA
2010 CP102197.1 GCA_024584435.1_02010 CDS open 2252067-2258111 6045_na     2014_aa hypothetical protein
2011 CP102197.1 GCA_024584435.1_02011 CDS open 2258132-2259349 1218_na     405_aa hypothetical protein
2012 CP102197.1 GCA_024584435.1_02012 CDS open 2259412-2261916 2505_na     834_aa hypothetical protein
2013 CP102197.1 GCA_024584435.1_02013 CDS open 2261916-2263415 1500_na     499_aa pknD_4 Serinethreonine-protein kinase PknD
2014 CP102197.1 GCA_024584435.1_02014 CDS open 2263527-2264717 1191_na     396_aa hypothetical protein
2015 CP102197.1 GCA_024584435.1_02015 CDS open 2264789-2266018 1230_na     409_aa hypothetical protein
2016 CP102197.1 GCA_024584435.1_02016 CDS open 2266015-2267250 1236_na     411_aa hypothetical protein
2017 CP102197.1 GCA_024584435.1_02017 CDS open 2267250-2268488 1239_na     412_aa hypothetical protein
2018 CP102197.1 GCA_024584435.1_02018 CDS open 2268482-2270116 1635_na     544_aa hypothetical protein
2019 CP102197.1 GCA_024584435.1_02019 CDS open 2270142-2270708 567_na     188_aa hypothetical protein
2020 CP102197.1 GCA_024584435.1_02020 CDS open 2270760-2271299 540_na     179_aa hypothetical protein
2021 CP102197.1 GCA_024584435.1_02021 CDS open 2271365-2275423 4059_na     1352_aa eccC ESX secretion system protein EccC
2022 CP102197.1 GCA_024584435.1_02022 CDS open 2275562-2276983 1422_na     473_aa hypothetical protein
2023 CP102197.1 GCA_024584435.1_02023 CDS open 2276983-2278956 1974_na     657_aa hypothetical protein
2024 CP102197.1 GCA_024584435.1_02024 CDS open 2280298-2280906 609_na     202_aa hypothetical protein
2025 CP102197.1 GCA_024584435.1_02025 CDS open 2280943-2281224 282_na     93_aa esxA ESAT-6-like protein EsxA
2026 CP102197.1 GCA_024584435.1_02026 CDS open 2281246-2281551 306_na     101_aa esxB ESAT-6-like protein EsxB
2027 CP102197.1 GCA_024584435.1_02027 CDS open 2281750-2283111 1362_na     453_aa hypothetical protein
2028 CP102197.1 GCA_024584435.1_02028 CDS open 2283115-2284566 1452_na     483_aa hypothetical protein
2029 CP102197.1 GCA_024584435.1_02029 CDS open 2284563-2285993 1431_na     476_aa hypothetical protein
2030 CP102197.1 GCA_024584435.1_02030 CDS open 2285990-2287186 1197_na     398_aa hypothetical protein
2031 CP102197.1 GCA_024584435.1_02031 CDS open 2287497-2287886 390_na     129_aa hypothetical protein
2032 CP102197.1 GCA_024584435.1_02032 CDS open 2287892-2289265 1374_na     457_aa hypothetical protein
2033 CP102197.1 GCA_024584435.1_02033 CDS open 2289262-2290644 1383_na     460_aa hypothetical protein
2034 CP102197.1 GCA_024584435.1_02034 CDS open 2290789-2291553 765_na     254_aa hypothetical protein
2035 CP102197.1 GCA_024584435.1_02035 CDS open 2291562-2292398 837_na     278_aa hypothetical protein
2036 CP102197.1 GCA_024584435.1_02036 CDS open 2292481-2292792 312_na     103_aa hypothetical protein
2037 CP102197.1 GCA_024584435.1_02037 CDS open 2293660-2294298 639_na     212_aa hypothetical protein
2038 CP102197.1 GCA_024584435.1_02038 CDS open 2294643-2296205 1563_na     520_aa ktrB Ktr system potassium uptake protein B
2039 CP102197.1 GCA_024584435.1_02039 CDS open 2296347-2296565 219_na     72_aa Putative DNA-binding proteinA
2040 CP102197.1 GCA_024584435.1_02040 CDS open 2296650-2296748 99_na     32_aa hypothetical protein
2041 CP102197.1 GCA_024584435.1_02041 CDS open 2296813-2297481 669_na     222_aa putative protein
2042 CP102197.1 GCA_024584435.1_02042 CDS open 2297478-2297855 378_na     125_aa hypothetical protein
2043 CP102197.1 GCA_024584435.1_02043 CDS open 2297977-2298882 906_na     301_aa rbsK Ribokinase
2044 CP102197.1 GCA_024584435.1_02044 CDS open 2299044-2300483 1440_na     479_aa hypothetical protein
2045 CP102197.1 GCA_024584435.1_02045 CDS open 2300567-2301460 894_na     297_aa menA 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase
2046 CP102197.1 GCA_024584435.1_02046 CDS open 2301503-2302825 1323_na     440_aa menE 2-succinylbenzoate--CoA ligase
2047 CP102197.1 GCA_024584435.1_02047 CDS open 2303031-2304473 1443_na     480_aa hypothetical protein
2048 CP102197.1 GCA_024584435.1_02048 CDS open 2304539-2306293 1755_na     584_aa malL_2 Oligo-1%2C6-glucosidase
2049 CP102197.1 GCA_024584435.1_02049 CDS open 2306287-2307267 981_na     326_aa menB 1%2C4-dihydroxy-2-naphthoyl-CoA synthase
2050 CP102197.1 GCA_024584435.1_02050 CDS open 2307545-2308603 1059_na     352_aa menC o-succinylbenzoate synthase
2051 CP102197.1 GCA_024584435.1_02051 CDS open 2308613-2310250 1638_na     545_aa menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase
2052 CP102197.1 GCA_024584435.1_02052 CDS open 2310359-2311846 1488_na     495_aa hypothetical protein
2053 CP102197.1 GCA_024584435.1_02053 CDS open 2311945-2313177 1233_na     410_aa menF Isochorismate synthase MenF
2054 CP102197.1 GCA_024584435.1_02054 CDS open 2313227-2313934 708_na     235_aa menG Demethylmenaquinone methyltransferase
2055 CP102197.1 GCA_024584435.1_02055 CDS open 2314068-2315255 1188_na     395_aa hypothetical protein
2056 CP102197.1 GCA_024584435.1_02056 CDS open 2315234-2316667 1434_na     477_aa hypothetical protein
2057 CP102197.1 GCA_024584435.1_02057 CDS open 2316688-2317200 513_na     170_aa hypothetical protein
2058 CP102197.1 GCA_024584435.1_02058 CDS open 2317263-2317904 642_na     213_aa hypothetical protein
2059 CP102197.1 GCA_024584435.1_02059 CDS open 2318615-2319895 1281_na     426_aa menJ Menaquinone reductase
2060 CP102197.1 GCA_024584435.1_02060 CDS open 2319924-2320283 360_na     119_aa nuoA NADH-quinone oxidoreductase subunit A
2061 CP102197.1 GCA_024584435.1_02061 CDS open 2320307-2320861 555_na     184_aa nuoB NADH-quinone oxidoreductase subunit B
2062 CP102197.1 GCA_024584435.1_02062 CDS open 2320858-2321595 738_na     245_aa nuoC NADH-quinone oxidoreductase subunit C
2063 CP102197.1 GCA_024584435.1_02063 CDS open 2321595-2322941 1347_na     448_aa nuoD NADH-quinone oxidoreductase subunit D
2064 CP102197.1 GCA_024584435.1_02064 CDS open 2322938-2323645 708_na     235_aa nuoE NADH-quinone oxidoreductase subunit E
2065 CP102197.1 GCA_024584435.1_02065 CDS open 2323642-2324946 1305_na     434_aa nuoF NADH-quinone oxidoreductase subunit F
2066 CP102197.1 GCA_024584435.1_02066 CDS open 2324943-2327501 2559_na     852_aa nuoG NADH-quinone oxidoreductase subunit G
2067 CP102197.1 GCA_024584435.1_02067 CDS open 2327498-2328829 1332_na     443_aa nuoH NADH-quinone oxidoreductase subunit H
2068 CP102197.1 GCA_024584435.1_02068 CDS open 2328822-2329475 654_na     217_aa ndhI NAD(P)H-quinone oxidoreductase subunit I%2C chloroplastic
2069 CP102197.1 GCA_024584435.1_02069 CDS open 2329472-2330449 978_na     325_aa hypothetical protein
2070 CP102197.1 GCA_024584435.1_02070 CDS open 2330446-2330745 300_na     99_aa NADH-quinone oxidoreductase subunit 11
2071 CP102197.1 GCA_024584435.1_02071 CDS open 2330761-2332737 1977_na     658_aa nuoL NADH-quinone oxidoreductase subunit L
2072 CP102197.1 GCA_024584435.1_02072 CDS open 2332763-2334307 1545_na     514_aa nuoM NADH-quinone oxidoreductase subunit M
2073 CP102197.1 GCA_024584435.1_02073 CDS open 2334304-2335872 1569_na     522_aa nuoN NADH-quinone oxidoreductase subunit N
2074 CP102197.1 GCA_024584435.1_02074 CDS open 2335869-2336882 1014_na     337_aa hepT Heptaprenyl diphosphate synthase component 2
2075 CP102197.1 GCA_024584435.1_02075 CDS open 2337067-2338578 1512_na     503_aa fprA NADPH-ferredoxin reductase FprA
2076 CP102197.1 GCA_024584435.1_02076 CDS open 2338717-2339592 876_na     291_aa htpX Protease HtpX
2077 CP102197.1 GCA_024584435.1_02077 CDS open 2339637-2340140 504_na     167_aa hypothetical protein
2078 CP102197.1 tRNA open 2340240-2340322 tRNA-Tyr(gta)
2079 CP102197.1 tRNA open 2340417-2340491 tRNA-Thr(ggt)
2080 CP102197.1 tRNA open 2340517-2340593 tRNA-Met(cat)
2081 CP102197.1 GCA_024584435.1_02081 CDS open 2340646-2340816 171_na     56_aa rpmG2 50S ribosomal protein L33 2
2082 CP102197.1 GCA_024584435.1_02082 CDS open 2340904-2341938 1035_na     344_aa hypothetical protein
2083 CP102197.1 GCA_024584435.1_02083 CDS open 2341954-2342613 660_na     219_aa lutR HTH-type transcriptional regulator LutR
2084 CP102197.1 GCA_024584435.1_02084 CDS open 2342786-2344354 1569_na     522_aa hypothetical protein
2085 CP102197.1 GCA_024584435.1_02085 CDS open 2344473-2345426 954_na     317_aa gsiC_2 Glutathione transport system permease protein GsiC
2086 CP102197.1 GCA_024584435.1_02086 CDS open 2345430-2347487 2058_na     685_aa btuD_13 Vitamin B12 import ATP-binding protein BtuD
2087 CP102197.1 GCA_024584435.1_02087 CDS open 2347484-2348302 819_na     272_aa ddpF putative D%2CD-dipeptide transport ATP-binding protein DdpF
2088 CP102197.1 GCA_024584435.1_02088 CDS open 2348305-2349222 918_na     305_aa dapA_2 4-hydroxy-tetrahydrodipicolinate synthase
2089 CP102197.1 GCA_024584435.1_02089 CDS open 2349328-2350248 921_na     306_aa nanK N-acetylmannosamine kinase
2090 CP102197.1 GCA_024584435.1_02090 CDS open 2350258-2350932 675_na     224_aa nanE Putative N-acetylmannosamine-6-phosphate 2-epimerase
2091 CP102197.1 GCA_024584435.1_02091 CDS open 2351022-2352263 1242_na     413_aa ybjJ Inner membrane protein YbjJ
2092 CP102197.1 GCA_024584435.1_02092 CDS open 2352274-2353362 1089_na     362_aa murB UDP-N-acetylenolpyruvoylglucosamine reductase
2093 CP102197.1 GCA_024584435.1_02093 CDS open 2353732-2353905 174_na     57_aa hypothetical protein
2094 CP102197.1 GCA_024584435.1_02094 CDS open 2354518-2355597 1080_na     359_aa Aminodeoxyfutalosine deaminase
2095 CP102197.1 GCA_024584435.1_02095 CDS open 2355601-2356407 807_na     268_aa Monoacylglycerol lipase
2096 CP102197.1 GCA_024584435.1_02096 CDS open 2356407-2357612 1206_na     401_aa aspC1 Aspartate aminotransferase
2097 CP102197.1 tRNA open 2357793-2357866 tRNA-Trp(cca)
2098 CP102197.1 GCA_024584435.1_02098 CDS open 2357900-2358196 297_na     98_aa secE Protein translocase subunit SecE
2099 CP102197.1 GCA_024584435.1_02099 CDS open 2358273-2359067 795_na     264_aa nusG Transcription terminationantitermination protein NusG
2100 CP102197.1 GCA_024584435.1_02100 CDS open 2359229-2359660 432_na     143_aa rplK 50S ribosomal protein L11
2101 CP102197.1 GCA_024584435.1_02101 CDS open 2359729-2360436 708_na     235_aa rplA 50S ribosomal protein L1
2102 CP102197.1 GCA_024584435.1_02102 CDS open 2360632-2361231 600_na     199_aa hypothetical protein
2103 CP102197.1 GCA_024584435.1_02103 CDS open 2361224-2362000 777_na     258_aa ecfT Energy-coupling factor transporter transmembrane protein EcfT
2104 CP102197.1 GCA_024584435.1_02104 CDS open 2361997-2363454 1458_na     485_aa ykoD Putative HMPthiamine import ATP-binding protein YkoD
2105 CP102197.1 GCA_024584435.1_02105 CDS open 2363451-2365271 1821_na     606_aa irtA Iron import ATP-bindingpermease protein IrtA
2106 CP102197.1 GCA_024584435.1_02106 CDS open 2365273-2367036 1764_na     587_aa irtB Iron import ATP-bindingpermease protein IrtB
2107 CP102197.1 GCA_024584435.1_02107 CDS open 2367322-2367843 522_na     173_aa rplJ 50S ribosomal protein L10
2108 CP102197.1 GCA_024584435.1_02108 CDS open 2367936-2368316 381_na     126_aa rplL 50S ribosomal protein L7L12
2109 CP102197.1 GCA_024584435.1_02109 CDS open 2369189-2369983 795_na     264_aa tipA HTH-type transcriptional activator TipA
2110 CP102197.1 tRNA open 2370216-2370288 tRNA-Asn(gtt)
2111 CP102197.1 GCA_024584435.1_02111 CDS open 2370731-2371681 951_na     316_aa hypothetical protein
2112 CP102197.1 GCA_024584435.1_02112 CDS open 2371704-2372060 357_na     118_aa hypothetical protein
2113 CP102197.1 GCA_024584435.1_02113 CDS open 2372249-2373766 1518_na     505_aa rbsA_3 Ribose import ATP-binding protein RbsA
2114 CP102197.1 GCA_024584435.1_02114 CDS open 2373763-2374773 1011_na     336_aa rbsC_2 Ribose import permease protein RbsC
2115 CP102197.1 GCA_024584435.1_02115 CDS open 2374867-2375931 1065_na     354_aa hypothetical protein
2116 CP102197.1 GCA_024584435.1_02116 CDS open 2376116-2377879 1764_na     587_aa fucI L-fucose isomerase
2117 CP102197.1 GCA_024584435.1_02117 CDS open 2378043-2379452 1410_na     469_aa rhaB L-Rhamnulokinase
2118 CP102197.1 GCA_024584435.1_02118 CDS open 2379427-2380422 996_na     331_aa lacI_2 Lactose operon repressor
2119 CP102197.1 GCA_024584435.1_02119 CDS open 2380435-2380866 432_na     143_aa fucU L-fucose mutarotase
2120 CP102197.1 GCA_024584435.1_02120 CDS open 2381197-2381946 750_na     249_aa srlR Glucitol operon repressor
2121 CP102197.1 GCA_024584435.1_02121 CDS open 2381957-2383306 1350_na     449_aa pdhC Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex
2122 CP102197.1 GCA_024584435.1_02122 CDS open 2383322-2384689 1368_na     455_aa Dihydrolipoyl dehydrogenase
2123 CP102197.1 GCA_024584435.1_02123 CDS open 2384721-2387174 2454_na     817_aa dxs_2 1-deoxy-D-xylulose-5-phosphate synthase
2124 CP102197.1 GCA_024584435.1_02124 CDS open 2387346-2388653 1308_na     435_aa hypothetical protein
2125 CP102197.1 GCA_024584435.1_02125 CDS open 2388657-2389280 624_na     207_aa hypothetical protein